Job Description P52131 Confidence 98.01% Date Thu Jan 5 12:05:36 GMT 2012 Rank 288 Aligned Residues 170 % Identity 15% Template c1cipA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein (guanine nucleotide-binding protein PDBTitle: gi-alpha-1 subunit of guanine nucleotide-binding protein2 complexed with a gtp analogue Resolution 1.50 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	G	I	M	G	K	T	G	A	G	K	S	S	L	C	N	A	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	L	L	L	G	A	G	E	S	G	K	S	T	I	V	K	Q	M	K	I	I	H	E	A	G	Y	S	E	E	E	C	K	Q	Y	K	A	V	V	Y	S	N	T	I	Q	S	I	I	A	I	I	R	A	M	G	R	L	K	I	D	F	G	D	A	A	R	A	D	D	A	R	Q	L	F	V	L	A	G	A	A
Template Known Secondary structure								S	T	T	S	S													S											T																							T				S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
																																																			58	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	E	V	S	P	V	S	D	.	.	.	.	V	A	A	C	T	R	D	P	L	R	F	R	L	Q	I	G	E	H
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template Conservation
Template Sequence		E	E	G	F	M	T	A	E	L	A	G	V	I	K	R	L	W	K	D	S	G	V	Q	A	C	F	N	R	S	R	E	Y	Q	L	N	D	S	A	A	Y	Y	L	N	D	L	D	R	I	A	Q	P	N	Y	I	P	T	Q	Q	D	V	L	R	T	R	V	K	T	T	G	I	V	E	T	H	F	T	F	K	D	L
Template Known Secondary structure		T	T	T																								T	T	G	G	G	S				T	T						T	T					T	S	T	T										T							S									T	T
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.												.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		F	M	T	I	V	D	L	P	G	V	G	E	S	G	V	R	D	T	E	Y	A	A	L	Y	R	E	Q	L	P	R	L	D	L	I	L	W	L	I	K	A	D	D	R	A	.	.	.	.	.	.	.	.	.	.	.	L	A	T	D	E	H	F	Y	R	Q	V	I	.	.	G	E	A	Y	R	H	K	M	L	F	V
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence											.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation											.	.	.	.	.	.	.
Template Sequence		H	F	K	M	F	D	V	G	G	.	.	.	.	.	.	.	Q	R	S	E	R	K	K	W	I	H	C	F	E	G	V	T	A	I	I	F	C	V	A	L	S	D	Y	D	L	V	L	A	E	D	E	E	M	N	R	M	H	E	S	M	K	L	F	D	S	I	C	N	N	K	W	F	T	D	T	S	I	I	L	F
Template Known Secondary structure											.	.	.	.	.	.	.	S	G	G	G	G	G	G	G	G	G	G		T	T		S								G	G	G	G	G				T	T																			T		G	G	G	T	T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.								.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160														.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	Q	S	D	K	A	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	G	G	N	I	L	S	T	E	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H	P	V	C	A	V	S	V	R	L	Q	W	G	L	R	V	M	A	E	R	M	I	K	C	L
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	K	K	D	L	F	E	E	K	I	K	K	S	P	L	T	I	C	Y	P	E	Y	A	G	S	N	T	Y	E	E	A	A	A	Y	I	Q	C	Q	F	E	D	L	N	K	R	K	D	T	K	E	I	Y	T	H	F	T	C	A	T	D	T	K	N	V	Q	F	V	F	D	A	V	T	D	V	I
Template Known Secondary structure													T	T	S		G	G	G	T		T	T			S		S															T	T		S		T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions