Job Description A4UR80 Confidence 77.19% Date Thu Jan 5 10:55:08 GMT 2012 Rank 331 Aligned Residues 146 % Identity 11% Template c3dkwB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:dnr protein; PDBTitle: crystal structure of dnr from pseudomonas aeruginosa. Resolution 3.60 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		E	R	G	D	F	V	F	I	P	L	G	S	H	H	Q	S	F	Y	.	E	F	G	A	T	R	I	L	N	V	G	I	S	K	R	F	F	E	Q	H	Y	L	P	L	L	P	Y	C	F	V	A	S	Q	V	Y	R	T	N	N	A	F	L	T	Y	V	E	T	V	I	S	S	L	N	F	R	E	T	G	L	E	E
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		P	A	H	A	F	Y	Y	L	I	S	G	C	V	K	I	Y	R	L	T	P	E	G	Q	E	K	I	L	E	V	T	N	E	R	N	T	F	A	E	A	M	M	F	M	D	T	P	N	Y	V	A	T	A	Q	A	V	V	P	S	Q	L	F	R	F	S	N	K	A	Y	L	R	Q	L	Q	D	N	T	P	L	A	L
Template Known Secondary structure		B										S								S	S	S	S	S									T	T				S						T	T		S	B		S	S					S	S																	S	S		S
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.							.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																													.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.
Query Sequence		F	V	E	M	V	T	F	Y	V	I	N	R	L	R	H	Y	R	E	E	Q	V	I	D	D	V	P	Q	W	L	K	S	T	V	E	K	M	H	D	E	E	Q	F	S	.	.	.	.	.	.	E	S	A	L	E	N	M	V	A	L	S	A	K	S	Q	E	Y	L	T	R	A	T	Q	R
Query Conservation																																													.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	L	A	K	L	S	T	R	L	H	Q	R	I	D	E	I	E	T	L	S	L	K	N	A	T	H	R	V	V	R	Y	L	L	T	L	A	A	H	A	P	G	E	N	C	R	V	E	I	P	V	A	K	Q	L	V	A	G	H	L	S	I	Q	P	E	T	F	S	R	I	M	H	R
Template Known Secondary structure																																						S	S	S	S	S	S		S	S	S		S	S				T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions