Job Description P0ABT5 Confidence 100.00% Date Thu Jan 5 11:16:20 GMT 2012 Rank 12 Aligned Residues 244 % Identity 22% Template d1vyra_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 0.9

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20										.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.														.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	I	G	Q	Y	Q	L	R	N	R	L	I	A	A	P	M	A	G	I	.	.	.	.	.	.	.	.	.	T	D	R	P	F	R	T	L	C	Y	E	M	G	A	G	L	T	V	S	E	M	M	S	S	N	P	Q	V	W	E	S	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	L	R	M
Query Conservation																						.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	V	G	A	V	T	A	P	N	R	V	F	M	A	P	L	T	R	L	R	S	I	E	P	G	D	I	P	T	P	L	M	G	E	Y	Y	R	Q	R	A	S	A	G	L	I	I	S	E	A	T	Q	I	S	A	Q	A	K	G	Y	A	G	A	P	G	L	H	S	P	E	Q	I	A	A	W	K	K	I	T	A
Template Known Secondary structure					T	T				S	S	S												B	T	T	T	T	B												T	T	T	S	S									S	S	S	T	T			S	T	T			B	S	S	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.																																																							.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	H	I	D	E	P	G	I	R	T	V	Q	I	A	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	K	E	M	A	D	A	A	R
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	H	A	E	D	G	R	I	A	V	Q	L	W	H	T	G	R	I	S	H	S	S	I	Q	P	G	G	Q	A	P	V	S	A	S	A	L	N	A	N	T	R	T	S	L	R	D	E	N	G	N	A	I	R	V	D	T	T	T	P	R	A	L	E	L	D	E	I	P	G	I	V	N	D	F	R	Q	A	V	A
Template Known Secondary structure						T	T											T	T	S	S		G	G	G	S	G	G	G						S	S	S					S							T	T	S															G	G	G
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.										100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.											.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	V	E	S	G	A	Q	I	I	D	I	N	M	G	.	.	.	.	.	.	.	.	.	C	P	A	K	K	V	N	R	K	L	A	G	S	A	L	L	Q	Y	P	D	V	V	K	S	I	L	T	E	V	V	N	A	V	D	V	P	V	T	L	K	I	R	T	G	.	.	.	.	.	.	.	.	.	.	W	A
Query Conservation																	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.																																						.							.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.
Template Sequence		N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	Q	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	V	C	N	E	W	S	A	D	R	.	I	G	I	R	V	S	P	I	G	T	F	Q	N	V	D	N	G	P
Template Known Secondary structure						T	T		S								T	T	S								T	T	T					S	T	T	S	S	S					T														S		G	G	G	.								S	S		B	T	T	B				T
Template Predicted Secondary structure																																																															.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	H	R	N	C	E	E	I	A	Q	L	A	E	D	C	G	I	Q	A	L	T	I	H	G	R	T	R	A	C	L	F	N	G	E	A	E	Y	D	S	I	R	A	V	K	Q	K	V	S	I	P	V	I	A	N	G	D	I	T	D	P	L	K	A	R	A	V	L	D	Y	T	G	A	D	A	L	M	I	G	R
Query Conservation
Alig confidence																																.	.																											.
Template Conservation																																.	.																											.
Template Sequence		N	E	E	A	D	A	L	Y	L	I	E	E	L	A	K	R	G	I	A	Y	L	H	M	S	E	T	D	L	A	G	.	.	G	K	P	Y	S	E	A	F	R	Q	K	V	R	E	R	F	H	G	V	I	I	G	A	G	A	Y	.	T	A	E	K	A	E	D	L	I	G	K	G	L	I	D	A	V	A	F	G	R
Template Known Secondary structure		T															T	T		S								B	T	T	B	.	.																		S						S	S		.											T	T	S		S					S
Template Predicted Secondary structure																																.	.																											.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	Q	G	R	P	W	I	F	R	E	I	Q	H	Y	L	D	T	G	E	L	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	I	A	N	P	D	L	V	A	R	L	Q	K	K	A	E	L	N	P	Q	R	P
Template Known Secondary structure							T	T								T								G
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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