Job Description P0ABT5 Confidence 95.64% Date Thu Jan 5 11:16:20 GMT 2012 Rank 392 Aligned Residues 202 % Identity 19% Template d1svda1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.80

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		11	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure							.	.	.																	.	.	.																												.	.	.	.	.	.	.	.
Query SS confidence							.	.	.																	.	.	.																												.	.	.	.	.	.	.	.
Query Sequence		R	L	I	A	A	.	.	.	P	M	A	G	I	T	D	R	P	F	R	T	L	C	Y	E	.	.	.	M	G	A	G	L	T	V	S	E	M	M	S	S	N	P	Q	V	W	E	S	D	K	S	R	L	R	M	.	.	.	.	.	.	.	.	V	H	I	D	E	P	G	I	R	T	V	Q	I	A	G	S	D	P
Query Conservation							.	.	.																	.	.	.																												.	.	.	.	.	.	.	.
Alig confidence							.	.	.																	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	L	G	C	T	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	K	D	D	E	N	I	N	S	Q	P	F	M	R	W	R	D	R	F	L	F	V	Q	D	A	T	E	T	A	E	A	Q	T	G	E	R	K	G	H	Y	L	N	V	T	A	P	T	P
Template Known Secondary structure									S		S	S	S																T	T		S						T	T		S	S	B	T	T	B																					S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.								.	.	.	.
Predicted Secondary structure																																																									.														.	.	.	.	.	.	.
Query SS confidence																																																									.														.	.	.	.	.	.	.
Query Sequence		K	E	M	A	D	A	A	R	I	N	V	E	S	G	A	Q	I	I	D	I	N	M	G	C	P	A	K	K	V	N	R	K	L	A	G	S	A	L	L	Q	Y	P	D	V	V	K	S	I	L	T	E	V	V	N	A	.	V	D	V	P	V	T	L	K	I	R	T	G	W	.	.	.	.	.	.	.	A	P	E	H
Query Conservation																																																									.														.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.									.														.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	M	Y	K	R	A	E	F	A	K	E	I	G	A	P	I	I	M	H	D	Y	I	.	.	.	.	.	.	.	.	.	T	G	G	F	T	.	.	.	.	.	.	.	.	.	.	A	N	T	G	L	A	K	W	C	Q	D	N	G	V	L	L	H	I	H	R	A	M	H	A	V	I	D	R	N	P	N	H	G
Template Known Secondary structure															T								T	T	.	.	.	.	.	.	.	.	.	T	T				.	.	.	.	.	.	.	.	.	.													T								T	T						S		T	T	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.										.	.	.	.	.											.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.																				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	C	E	E	I	A	Q	L	A	E	D	C	G	I	Q	A	L	T	I	H	G	R	T	R	A	C	L	F	N	G	E	A	E	Y	D	S	I	R	A	V	K	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	I	P	V	I	A	N	G	D	I	T	D	P	L	K	A
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																																																												.
Template Sequence		I	H	F	R	V	L	T	K	I	L	R	L	S	G	G	D	H	L	H	T	G	T	V	V	G	K	L	E	G	D	R	A	S	T	L	G	W	I	D	L	L	R	E	S	F	I	P	E	D	R	S	R	G	I	F	F	D	Q	D	W	G	S	M	P	G	V	F	A	V	A	S	G	G	I	.	H	V	W	H	M
Template Known Secondary structure																	S							S	T	T	S		G	G	G														S					B	G	G	G	T	B		S					T	T										S	S		.		G	G	G
Template Predicted Secondary structure																																																																												.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380
		210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		R	A	V	L	D	Y	T	G	A	D	.	A	L	M	I	G	R	A	A	Q	G	R	P	W
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		P	A	L	V	N	I	F	G	D	D	S	V	L	Q	F	G	G	G	T	L	G	H	P	W
Template Known Secondary structure										S	S						S					T		T	T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions