Job Description P0ABT5 Confidence 98.19% Date Thu Jan 5 11:16:20 GMT 2012 Rank 209 Aligned Residues 168 % Identity 17% Template d1piia2 SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	S	N	P	Q	V	W	E	S	D	K	S	R	L	R	M	V	H	I	D	E	P	G	I	R	T	V	Q	I	A	G	S	D	P	K	E	M	A	D	A	A	R	I	N	V	E	S	G	A	Q	I	I	D	I	N	M	G	C	P	A	K	K	V	N	R	K	L	A	G	S	A	L	L	Q	Y	P	D	V	V
Query Conservation
Alig confidence																																												.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	T	D	E	K	Y	F	Q	G	S	F	N	F	L	P	I	V	S	Q	I	A	P	Q	P	I	L	C	K	D	F	I	I	D	P	Y	Q	I	Y	L	A	R	.	.	.	.	Y	Y	Q	A	D	A	C	L	L	M	L	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	D	D	Q	Y
Template Known Secondary structure						S	T	T	T				T	T											S						S				S									.	.	.	.		T	T		S						T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140																.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	I	L	T	E	V	V	N	A	V	D	V	P	V	T	L	K	I	R	T	G	W	A	P	E	H	R	N	C	E	E	I	A	Q	L	A	E	D	C	G	I	Q	A	L	T	I	H	G	R	T	R	A	C	L	F	N	G	E	A	E	Y	D	S	I	R	A	V	K	Q	K	V	S	I	P	V	I	A	N	G
Query Conservation
Alig confidence											.												.	.	.	.	.	.	.	.	.																																										.
Template Conservation											.												.	.	.	.	.	.	.	.	.																																										.
Template Sequence		R	Q	L	A	A	V	A	H	S	.	L	E	M	G	V	L	T	E	V	S	N	.	.	.	.	.	.	.	.	.	E	E	E	Q	E	R	A	I	A	L	G	A	K	V	V	G	I	N	N	R	D	L	R	D	L	S	I	D	L	N	R	T	R	E	L	A	P	K	L	G	H	.	N	V	T	V	I	S	E	S
Template Known Secondary structure											.	T	T									S	.	.	.	.	.	.	.	.	.										T	T		S						S			T	T	T	T				T												T	.	T	S						S
Template Predicted Secondary structure											.												.	.	.	.	.	.	.	.	.																																										.
Template SS confidence
		147	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.										.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	T	D	P	L	K	A	R	A	V	L	D	Y	T	G	A	D	A	L	M	I	G	R	A	A	Q	G	R	P	W	I	F	R	E	I	Q	H	Y	L
Query Conservation
Alig confidence													.	.
Template Conservation													.	.
Template Sequence		G	I	N	T	Y	A	Q	V	R	E	L	.	.	S	H	F	A	N	G	F	L	I	G	S	A	L	M	A	H	D	D	L	H	A	A	V	R	R	V	L
Template Known Secondary structure													.	.	T	T	T		S										T		S
Template Predicted Secondary structure													.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions