Job Description P0ABT5 Confidence 100.00% Date Thu Jan 5 11:16:20 GMT 2012 Rank 14 Aligned Residues 245 % Identity 19% Template d1gwja_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.2

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.								.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60
Predicted Secondary structure																				.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	I	G	Q	Y	Q	L	R	N	R	L	I	A	A	P	M	A	.	.	.	.	.	.	.	G	I	T	D	R	P	F	R	T	L	C	Y	E	M	G	A	G	L	T	V	S	E	M	M	S	S	N	P	Q	V	W	E	S	D	K	S	R	L	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	V	H
Query Conservation																				.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	L	G	S	L	S	L	P	N	R	V	I	M	A	P	L	T	R	S	R	T	P	D	S	V	P	G	R	L	Q	Q	I	Y	Y	G	Q	R	A	S	A	G	L	I	I	S	E	A	T	N	I	S	P	T	A	R	G	Y	V	Y	T	P	G	I	W	T	D	A	Q	E	A	G	W	K	G	V	V	E	A	V
Template Known Secondary structure					T	T				S		S												S	S	S													T	T	T	S	S									S	S	G	G	G			B	T	T			B		S	S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.																																																								.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	E	P	G	I	R	T	V	Q	I	A	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	K	E	M	A	D	A	A	R	I
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	A	K	G	G	R	I	A	L	Q	L	W	H	V	G	R	V	S	H	E	L	V	Q	P	D	G	Q	Q	P	V	A	P	S	A	L	K	A	E	G	A	E	C	F	V	E	F	E	D	G	T	A	G	L	H	P	T	S	T	P	R	A	L	E	T	D	G	I	P	G	I	V	E	D	Y	R	Q	A	A	Q	R
Template Known Secondary structure				T	T											T	T	S			T	T	T	S	G	G	G						S	S	S				T	T								T	T	S															G	G	G
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.										.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.										.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.
Query Sequence		N	V	E	S	G	A	Q	I	I	D	I	N	.	.	.	.	.	.	.	.	.	M	G	C	P	A	K	K	V	N	R	K	L	A	G	S	A	L	L	Q	Y	P	D	V	V	K	S	I	L	T	E	V	V	N	A	V	D	V	P	V	T	L	K	I	R	T	.	.	.	.	.	.	.	.	.	G	W	A	P	E
Query Conservation														.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.																																								.						.	.	.	.	.	.	.	.	.
Template Conservation																																																														.
Template Sequence		A	K	R	A	G	F	D	M	V	E	V	H	A	A	N	A	C	L	P	N	Q	F	L	A	T	G	T	N	R	R	T	D	Q	Y	G	G	S	I	E	N	R	A	R	F	P	L	E	V	V	D	A	V	A	E	V	F	G	P	E	R	.	V	G	I	R	L	T	P	F	L	E	L	F	G	L	T	D	D	E	P
Template Known Secondary structure					T	T		S								T	T								S	T	T	T					S	T	T	S	S	S					T																G	G	G	.							T	T				T	T				S
Template Predicted Secondary structure																																																														.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	N	C	E	E	I	A	Q	L	A	E	D	C	G	I	Q	A	L	T	I	H	G	R	T	R	A	C	L	F	N	G	E	A	E	Y	D	S	I	R	A	V	K	Q	K	V	S	I	P	V	I	A	N	G	D	I	T	D	P	L	K	A	R	A	V	L	D	Y	T	G	A	D	A	L	M	I	G	R	A	A
Query Conservation
Alig confidence																																			.																							.
Template Conservation																																			.																							.
Template Sequence		E	A	M	A	F	Y	L	A	G	E	L	D	R	R	G	L	A	Y	L	H	F	N	E	P	D	W	I	G	G	D	I	T	Y	.	P	E	G	F	R	E	Q	M	R	Q	R	F	K	G	G	L	I	Y	C	G	N	Y	.	D	A	G	R	A	Q	A	R	L	D	D	N	T	A	D	A	V	A	F	G	R	P	F
Template Known Secondary structure																T		S							S		B	T	T	B					.		T	T											S						S	S		.											T	T	S		S					S
Template Predicted Secondary structure																																			.																							.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	R	P	W	I	F	R	E	I	Q	H	Y	L	D	T	G	E	L	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	N	P	D	L	P	E	R	F	R	L	G	A	A	L	N	E	P	D	P
Template Known Secondary structure					T	T								T								G
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions