Job Description P0ABT5 Confidence 94.75% Date Thu Jan 5 11:16:20 GMT 2012 Rank 411 Aligned Residues 134 % Identity 12% Template d1gk8a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.4

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	D	P	K	E	M	A	D	A	A	R	I	N	V	E	S	G	A	Q	I	I	D	I	N	M	G	C	P	A	K	K	V	N	R	K	L	A	G	S	A	L	L	Q	Y	P	D	V	V	K	S	I	L	T	E	V	V	N	A	V	D	V	P	V	T	L	K	I	R	T	G	W	A	P	E	H	R	N	C	E
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.																																	.	.
Template Conservation																																		.	.	.	.	.	.	.																																	.	.
Template Sequence		G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	D	D	E	N	V	N	S	Q	P	F	.	.	.	.	.	.	.	M	R	W	R	D	R	F	L	F	V	A	E	A	I	Y	K	A	Q	A	E	T	G	E	V	K	G	H	Y	L	N	A	T	.	.	A	G	T	C	E	E	M
Template Known Secondary structure																		T	T		S	B				T	T		S	S	B	T	T	.	.	.	.	.	.	.	B																					S	S			B							.	.		S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.																																	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200													.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	A	Q	L	A	E	D	C	G	I	Q	A	L	T	I	H	G	R	T	R	A	C	L	F	N	G	E	A	E	Y	D	S	I	R	A	V	K	.	.	.	Q	K	V	S	I	P	V	I	A	N	.	.	.	.	.	.	.	.	.	.	.	.	G	D	I	T	D	P	L	K	A	R	A	V	L	D	Y	T	G
Query Conservation																																								.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.											.	.	.											.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation																						.	.	.	.	.	.	.	.																																											.
Template Sequence		M	K	R	A	V	A	K	E	L	G	V	P	I	I	M	H	D	Y	L	T	.	.	.	.	.	.	.	.	G	G	F	T	A	N	T	S	L	A	I	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	R	N	H	G	I	H	F	R	V	.	L	A	K	A	L	R	M	S	G
Template Known Secondary structure								T	T	T	T		S									.	.	.	.	.	.	.	.																	T								T	T						S		S	S	S	S						.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.																																											.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270									.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.
		218	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	L	M	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	H	L	H	S	G
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions