Job Description P0ABT5 Confidence 100.00% Date Thu Jan 5 11:16:20 GMT 2012 Rank 24 Aligned Residues 233 % Identity 21% Template d1ep3a_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.10

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																											.	.	.	.	50	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	I	G	Q	Y	Q	L	R	N	R	L	I	A	A	P	M	A	G	I	T	D	R	P	F	R	T	L	C	Y	E	M	G	A	G	L	T	V	S	E	M	M	S	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	V	W	E	S	D	K	S
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	L	P	G	L	D	L	K	N	P	I	I	P	A	S	G	C	F	G	F	G	E	E	Y	A	K	Y	Y	D	L	N	K	L	G	S	I	M	V	K	A	T	T	L	H	P	R	F	G	N	P	T	P	R	V	A	E	T	A	S	G	M	L	N	A	I	G	L	Q	N	P	G	L	E	V	I	M	T	E	K
Template Known Secondary structure					T	T				S	S	S					T	T	S	S	T	T	S	T	T	G	G	G	T	S		G	G	G	S	S									S	S		B					S							T	T										B									T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		R	L	R	M	V	H	I	D	E	P	G	I	R	T	V	Q	I	A	G	S	D	P	K	E	M	A	D	A	A	R	I	N	V	E	.	S	G	A	Q	I	I	D	I	N	M	G	C	P	A	K	K	V	N	R	K	L	A	G	S	A	L	L	Q	Y	P	D	V	V	K	S	I	L	T	E	V	V	N	A	V	D
Query Conservation																																				.
Alig confidence																																				.														.	.	.	.
Template Conservation																																																		.	.	.	.
Template Sequence		L	P	W	L	N	E	N	F	P	E	L	P	I	I	A	N	V	A	G	S	E	E	A	D	Y	V	A	V	C	A	K	I	G	D	A	A	N	V	K	A	I	E	L	N	I	S	C	P	.	.	.	.	N	V	K	H	G	G	Q	A	F	G	T	D	P	E	V	A	A	A	L	V	K	A	C	K	A	V	S	K
Template Known Secondary structure										T	T	S									S	S												T	T	S	T	T										S		.	.	.	.		G	G	G	T	T			G	G	G																	S
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																					180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	P	V	T	L	K	I	R	T	G	W	A	P	E	H	R	N	C	E	E	I	A	Q	L	A	E	D	C	G	I	Q	A	L	T	I	H	G	R	T	R	A	C	L	F	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	E	Y	D	S	I	R	A	V	K	Q	K	V
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		V	P	L	Y	V	K	L	S	P	N	V	T	D	.	.	.	.	I	V	P	I	A	K	A	V	E	A	A	G	A	D	G	L	T	M	I	N	T	L	M	G	V	R	F	D	L	K	T	R	Q	P	I	L	A	N	I	T	G	G	L	S	G	P	A	I	K	P	V	A	L	K	L	I	H	Q	V	A	Q	D	V
Template Known Secondary structure		S								S		S	S		.	.	.	.	S										T	T		S													B		T	T	T		S	B	S	S	T	T	S						S	G	G	G													T	T
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	P	V	I	A	N	G	D	I	T	D	P	L	K	A	R	A	V	L	D	Y	T	G	A	D	A	L	M	I	G	R	A	A	Q	G	R	P	W	I	F	R	E	I	Q	H	Y	L	D
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		D	I	P	I	I	G	M	G	G	V	A	N	A	Q	D	V	L	E	M	Y	M	A	.	G	A	S	A	V	A	V	G	T	A	N	F	A	D	P	F	V	C	P	K	I	I	D	K	L	P
Template Known Secondary structure		S	S						S	S			S											.	T		S						T						T	T
Template Predicted Secondary structure																								.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions