Job Description P0ABT5 Confidence 99.92% Date Thu Jan 5 11:16:20 GMT 2012 Rank 29 Aligned Residues 233 % Identity 19% Template d1d3ga_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.60

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	G	Q	Y	Q	L	R	N	R	L	I	A	A	P	M	A	G	I	T	D	R	P	F	R	T	L	C	Y	E	M	G	A	G	L	T	V	S	E	M	M	S	S	N	P	Q	V	W	E	S	D	K	S	R	L	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.
Template Sequence		R	V	L	G	H	K	F	R	N	P	V	G	I	A	A	G	F	D	.	K	H	G	E	A	V	D	G	L	Y	K	M	G	F	G	F	V	E	I	G	S	V	T	P	K	P	Q	E	G	N	P	R	P	R	V	F	R	L	P	E	D	Q	A	V	I	N	R	Y	G	F	N	S	H	G	L	S	V	V	E	H	R
Template Known Secondary structure				T	T				S	S	S					T	T	S	S	.	T	T	S	S	S								T		S									S	S		B			S		S							G	G	G	T										B
Template Predicted Secondary structure																				.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
											59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	V	H	I	D	E	P	G	I	R	T	V	Q	I	A	G	S	D	.	.	.	.	.	P	K	E	M	A	D	A	A	R	I	N	V	E	S	G	A	Q	I	I	D	I	N	M	G	C	P	A	K	K	V	N	R	K	L	A	G	S	A	L	L	Q	Y	P	D	V	V	K	S	I
Query Conservation		.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																		.	.	.	.	.												.																.	.	.
Template Conservation																																												.																.	.	.
Template Sequence		L	R	A	R	Q	Q	K	Q	A	K	L	T	E	D	G	L	P	L	G	V	N	L	G	K	N	K	T	S	V	D	A	A	E	D	Y	A	E	G	V	R	V	L	.	G	P	L	A	D	Y	L	V	V	N	V	S	S	P	N	.	.	.	T	A	G	L	G	K	A	E	L	R	R	L	L	T	K	V	L	Q	E
Template Known Secondary structure				T	T										T	T											T	T		S														.	G	G	G		S						S			T	T	.	.	.	S	T	T
Template Predicted Secondary structure																																												.																.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.														.	.	.	.	.	.	180	.	.	.					.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query Sequence		L	T	E	V	V	N	A	V	D	V	P	V	T	L	K	I	R	T	G	W	A	P	E	H	R	N	C	E	E	I	A	Q	L	A	E	D	C	G	I	Q	A	L	T	I	H	G	R	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	A	C	L	F	N	G	E	A	E	Y	.	.	.	.	D	S	I	R
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Alig confidence																	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																	.	.
Template Sequence		R	D	G	L	R	R	V	H	R	P	A	V	L	V	K	.	.	I	A	P	D	L	T	S	Q	D	K	E	D	I	A	S	V	V	K	E	L	G	I	D	G	L	I	V	T	N	T	T	V	S	R	P	A	G	L	Q	G	A	L	R	S	E	T	G	G	L	S	G	K	P	L	R	D	L	S	T	Q	T	I	R
Template Known Secondary structure				T	S		G	G	G								.	.			S																		T										B	S				T	T				T	T	T	T	S	S	S					G	G	G
Template Predicted Secondary structure																	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		188	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure								.	.																																				.
Query SS confidence								.	.																																				.
Query Sequence		A	V	K	Q	K	V	.	.	S	I	P	V	I	A	N	G	D	I	T	D	P	L	K	A	R	A	V	L	D	Y	T	G	A	D	A	L	M	I	G	R	A	A	Q	.	G	R	P	W	I	F	R	E	I	Q	H	Y	L	D
Query Conservation								.	.																																				.
Alig confidence								.	.																							.													.
Template Conservation																																.
Template Sequence		E	M	Y	A	L	T	Q	G	R	V	P	I	I	G	V	G	G	V	S	S	G	Q	D	A	L	E	K	I	R	A	.	G	A	S	L	V	Q	L	Y	T	A	L	T	F	W	G	P	P	V	V	G	K	V	K	R	E	L	E
Template Known Secondary structure							T	T	T		S						S	S			S											.	T		S					S								T
Template Predicted Secondary structure																																.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions