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Job DescriptionP0ABT5
Confidence96.96%DateThu Jan 5 11:16:20 GMT 2012
Rank333Aligned Residues158
% Identity11%Templatec3tfxB_
PDB info PDB header:lyaseChain: B: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of orotidine 5'-phosphate decarboxylase from2 lactobacillus acidophilus
Resolution2.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90.........100.........110.........120.........130.........140...
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Query Sequence  PGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTG
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Template Sequence  DRPVIVALDLDNEEQLNKILSKLGDPHDVFVKV. . . . . . . . . . . . . . GXELFYNAGI. . DVIKKLTQQ. GYKIFLDLKXH
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SSTT

GGG
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T...T

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   2.......10.........20.........30.... .....40.... .....50... ......60....
 
   144.....150.........160.........170...
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Query Sequence  WAPEHRNCEEIAQLAEDCGIQALTIHGRTR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . DIPNTVYNGAKALAKLGITFTTVHALGGSQXIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPXAE
Template Known Secondary structure  ..S
TTT
SGGG


TT




S
TT

TS

SS
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   65....70.........80.........90.........100.........110.........120.........130.........140..
 
   174.....180.........190... ......200.........210.........220.........230.........240.
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Query Sequence  . . . . . . . . . . . ACLFNGEAEYDSIRAVKQKV. SIPVIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHYL
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Template Sequence  QVLSLAKXAKHSGADGVICSPLEVKKLHENIGDDFLYVTPGI. RPATPKXAKEW. GSSAIVVGRPITLASDPKAAYEAIK
Template Known Secondary structure  TT
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   143......150.........160.........170.........180.... .....190..... ....200.........210.........220
 
   242
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Query Sequence  D
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Template Sequence  K
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   232
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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