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Job DescriptionP0ABT5
Confidence98.14%DateThu Jan 5 11:16:20 GMT 2012
Rank218Aligned Residues149
% Identity13%Templatec3ritE_
PDB info PDB header:isomeraseChain: E: PDB Molecule:dipeptide epimerase; PDBTitle: crystal structure of dipeptide epimerase from methylococcus capsulatus2 complexed with mg and dipeptide l-arg-d-lys
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70.........80.........90.........100.........110.........120.........130
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Query Sequence  SDKSRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDVVKSILTEVVN
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Template Sequence  GLPLVEILGRAHDSLPTSVTIGIKPVEETLAEAREHLALGFRVLKVKLCGD. . . . . . . . . . . . . . . . EEQDFERLRRLHE
Template Known Secondary structure  TSBS

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   116...120.........130.........140.........150.........160...... ...170.........
 
   131........140.........150.........160.........170.........180.........190.........200.........210
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Query Sequence  AVDVPVTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKAR
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Template Sequence  TLAGRAVVRVDPNQSYDRDGLLRLDRLVQELGIEFI. . . . . . . . EQPFPAGRTDWLRALPKAIRRRIAADESLLGPADAF
Template Known Secondary structure  SSSSS
TT


T


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   180.........190.........200.........210..... ....220.........230.........240.........250.
 
   211 ........220...
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Query Sequence  A. VLDYTGADALMI
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Template Sequence  ALAAPPAACGIFNI
Template Known Secondary structure  SSS
S
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   252.......260.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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