Job Description P0ABT5 Confidence 99.95% Date Thu Jan 5 11:16:20 GMT 2012 Rank 26 Aligned Residues 230 % Identity 18% Template c3oixA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative dihydroorotate dehydrogenase; dihydroorotate PDBTitle: crystal structure of the putative dihydroorotate dehydrogenase from2 streptococcus mutans Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																									.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	G	Q	Y	Q	L	R	N	R	L	I	A	A	P	M	A	G	I	T	D	R	P	F	R	T	L	C	Y	E	M	G	A	G	L	T	V	S	E	M	M	S	S	N	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	W	E	S	D	K	S	R	L	R
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	I	G	S	F	D	F	D	N	C	L	M	N	A	A	G	V	Y	C	M	T	R	E	E	L	A	A	I	D	H	S	E	A	G	S	F	V	T	T	G	T	L	E	E	R	A	G	N	P	Q	P	R	Y	A	D	T	K	L	G	S	I	N	S	M	G	L	P	N	L	G	I	N	Y	Y	L	D	Y	V	T	E
Template Known Secondary structure				T	T				S		S					T	T	S	S		S	S									T	S	S		S	B		B			B		S	S		B			S		S							S	S										B	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	H	I	D	E	P	G	I	R	T	V	Q	I	A	G	S	D	P	K	E	M	A	D	A	A	R	I	N	V	E	S	G	A	Q	I	I	D	I	N	M	G	C	P	A	K	K	V	N	R	K	L	A	G	S	A	L	L	Q	Y	P	D	V	V	K	S	I	L	T	E	V	V	N	A	V	D	V	P	V	T
Query Conservation
Alig confidence																																																	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.
Template Sequence		L	Q	K	Q	P	D	S	K	N	H	F	L	S	L	V	G	M	S	P	E	E	T	H	T	I	L	M	V	E	A	S	K	Y	Q	G	L	V	E	L	N	L	S	C	P	N	V	P	.	.	.	.	.	.	G	P	Q	I	A	Y	D	F	E	T	T	D	Q	I	L	S	E	V	F	T	Y	F	T	K	P	L	G
Template Known Secondary structure					S	T	T											S	S										T	T	T	S	S			S							S				S		.	.	.	.	.	.				G	G	G													T	T	T			S
Template Predicted Secondary structure																																																	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.							.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																					.	.	.	.	.	.	.	190	.	.	.	.			.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		L	K	I	R	T	G	W	A	P	E	H	R	N	C	E	E	I	A	Q	L	A	E	D	C	G	I	Q	A	L	T	I	H	G	R	T	R	A	C	L	F	N	G	E	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	S	I	R	A	V	K	Q	K	V	S	.	.	I
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence								.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation								.	.	.
Template Sequence		I	K	L	P	P	Y	.	.	.	F	D	I	V	H	F	D	Q	A	A	A	I	F	N	Y	P	L	T	F	V	N	C	I	N	S	I	G	N	G	L	V	I	E	D	E	T	V	V	I	P	K	N	G	F	G	G	I	G	G	D	Y	V	K	P	T	A	L	A	N	V	H	A	F	Y	K	R	L	N	P	S	I
Template Known Secondary structure								.	.	.																		S																T	T						G	G	G							G	G	G													T	T	S		T	T	S
Template Predicted Secondary structure								.	.	.
Template SS confidence
		164	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		P	V	I	A	N	G	D	I	T	D	P	L	K	A	R	A	V	L	D	Y	T	G	A	D	A	L	M	I	G	R	A	A	Q	G	R	.	P	W	I	F	R	E	I	Q	H	Y	L	D
Query Conservation																																					.
Alig confidence										.												.															.
Template Conservation										.												.
Template Sequence		Q	I	I	G	T	G	G	V	.	T	G	R	D	A	F	E	H	I	L	C	.	G	A	S	M	V	Q	I	G	T	A	L	H	Q	E	G	P	Q	I	F	K	R	I	T	K	E	L	A
Template Known Secondary structure							S			.												.	T		S					S								T
Template Predicted Secondary structure										.												.
Template SS confidence
		243	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions