Job Description P0ABT5 Confidence 97.81% Date Thu Jan 5 11:16:20 GMT 2012 Rank 255 Aligned Residues 223 % Identity 14% Template c3lerA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 campylobacter jejuni subsp. jejuni nctc 11168 Resolution 1.84 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	K	E	M	A	D	A	A	R	I	N	V	E	S	G	A	Q	I	I	D	I	N	M	G	C	P	A	K	K	V	N	R	K	L	A	G	S	A	L	L	Q	Y	P	D	V	V	K	S	I	L	T	E	V	V	N	A	V	D	V	P	V	T	L	K	I	R	T	G	W	A	P	E	H	R	N	C	E	E	I
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	Q	S	Y	A	R	L	I	K	R	Q	I	E	N	G	I	D	A	V	V	P	V	.	.	.	.	.	.	.	.	.	.	G	T	T	G	E	S	A	T	L	T	H	E	E	H	R	T	C	I	E	I	A	V	E	T	C	K	G	T	K	V	K	V	L	A	G	A	G	S	N	A	T	H	E	A	V	G	L
Template Known Secondary structure															T	T	T						T	T	.	.	.	.	.	.	.	.	.	.	S	T	T	T	T	G	G	G	S																	T	T	S	S										S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.											.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.							200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	L	A	E	D	C	G	I	Q	A	L	T	I	H	G	R	T	R	A	C	L	F	N	G	E	A	E	Y	D	S	I	R	A	V	K	Q	K	V	S	I	P	V	I	A	.	.	.	.	.	.	N	G	D	I	T	D	P	L	K	A	R	A	V	L	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																								.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.
Template Sequence		A	K	F	A	K	E	H	G	A	D	G	I	L	S	V	A	P	Y	Y	N	K	.	P	T	Q	Q	G	L	Y	E	H	Y	K	A	I	A	Q	S	V	D	I	P	V	L	L	Y	N	V	P	G	R	T	G	C	E	I	S	T	D	T	I	I	K	L	F	R	D	C	E	N	I	Y	G	V	E	A	S	G	N	I
Template Known Secondary structure								T	T		S									S	S		.																		S	S												S																T	T							S	S
Template Predicted Secondary structure																							.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
																														216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	A	D	A	L	M	I	G	R	A	A	Q	G	R	P	W	I	F	R	E	I	Q	H	Y	L	D	T	G	E	L	L	P	P	L	P	L	A	E	V	K	R	L	L	C	A	H	V	R	E	L	H
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.															.	.	.	.	.	.
Template Conservation																																												.															.	.	.	.	.	.
Template Sequence		D	K	C	V	D	L	L	A	H	E	P	R	X	X	L	I	S	G	E	D	A	I	N	Y	P	I	L	S	N	G	G	K	G	V	I	S	V	T	S	N	L	L	.	P	D	X	I	S	A	L	T	H	F	A	L	D	E	.	.	.	.	.	.	N	Y	K	E	A	K	K	I	N	D	E	L	Y	N	I	N	K
Template Known Secondary structure												T	T	S	B						G	G	G							T	T							S	G	G	G	T		.													T	T	.	.	.	.	.	.												T
Template Predicted Secondary structure																																												.															.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.							.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	Y	G	P	A	K	G	Y	R	I	A	R	K	H	V	S	W	Y	L	Q	E	H	A	P	N	D	Q	F	R	R	T	F	N	A	I	E	D	A	S	E	Q	L	E	A	L	E	A	Y	F	E	N	F
Query Conservation
Alig confidence													.	.								.																					.	.
Template Conservation													.	.								.																					.	.
Template Sequence		I	L	F	C	E	S	N	P	I	P	I	.	.	K	T	A	X	Y	L	A	.	G	L	I	E	S	L	E	F	R	L	P	L	C	S	P	S	K	E	N	F	.	.	A	K	I	E	E	V	X	K	K	Y
Template Known Secondary structure			T	T	S	S	S	T	T				.	.							T	.	T	S	S	S						T	T										.	.								T	T	S
Template Predicted Secondary structure													.	.								.																					.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions