Job Description P0ABT5 Confidence 100.00% Date Thu Jan 5 11:16:20 GMT 2012 Rank 4 Aligned Residues 248 % Identity 21% Template c3gr7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadph dehydrogenase; PDBTitle: structure of oye from geobacillus kaustophilus, hexagonal2 crystal form Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.												.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	I	G	Q	Y	Q	L	R	N	R	L	I	A	A	P	M	A	G	I	T	.	.	.	.	.	.	.	.	.	.	.	D	R	P	F	R	T	L	C	Y	E	M	G	A	G	L	T	V	S	E	M	M	S	S	N	P	Q	V	W	E	S	D	K	S	R	L	R	M	V	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	T	I	R	G	L	T	L	K	N	R	I	V	M	S	P	M	C	M	Y	S	C	D	T	K	D	G	A	V	R	T	W	H	K	I	H	Y	P	A	R	A	V	G	Q	V	G	L	I	I	V	E	A	T	G	V	T	P	Q	G	R	I	S	E	R	D	L	G	I	W	S	D	D	H	I	A	G	L	R	E	L
Template Known Secondary structure					T	T				S	S	S												T	T	S	S	S																T	T		S									S	S	G	G	G		S	S	T	T	S				S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.																																				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Query SS confidence		.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Query Sequence		.	.	.	H	I	D	E	P	G	I	R	T	V	Q	I	A	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	K	E	M	A	D	A	A	R	I	N	V	E	S	G	A	Q	I	I	D	I	N	M	G	.	.
Query Conservation		.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Alig confidence		.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation
Template Sequence		V	G	L	V	K	E	H	G	A	A	I	G	I	Q	L	A	H	A	G	R	K	S	Q	V	P	G	E	I	I	A	P	S	A	V	P	F	D	D	S	S	P	T	P	K	E	M	T	K	A	D	I	E	E	T	V	Q	A	F	Q	N	G	A	R	R	A	K	E	A	G	F	D	V	I	E	I	H	A	A	H	G
Template Known Secondary structure								T	T											G	G	G			S	S	S					S	S	S			S	S	T	T	S																													T		S								T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
									100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																													.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																													.	.	.	.
Query Sequence		.	.	.	.	.	.	.	C	P	A	K	K	V	N	R	K	L	A	G	S	A	L	L	Q	Y	P	D	V	V	K	S	I	L	T	E	V	V	N	A	V	D	V	P	V	T	L	K	I	R	T	G	.	.	.	.	W	A	P	E	H	R	N	C	E	E	I	A	Q	L	A	E	D	C	G	I	Q	A	L	T	I
Query Conservation		.	.	.	.	.	.	.																																													.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																													.	.	.	.
Template Conservation
Template Sequence		Y	L	I	N	E	F	L	S	P	L	S	N	R	R	Q	D	E	Y	G	G	S	P	E	N	R	Y	R	F	L	G	E	V	I	D	A	V	R	E	V	W	D	G	P	L	F	V	R	I	S	A	S	D	Y	H	P	D	G	L	T	A	K	D	Y	V	P	Y	A	K	R	M	K	E	Q	G	V	D	L	V	D	V
Template Known Secondary structure										T	T	T					S	T	T	S	S	S																					S								S				S	T	T	S			G	G	G											T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		169	170	.	.				.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure						.	.	.
Query SS confidence						.	.	.
Query Sequence		H	G	R	T	.	.	.	R	A	C	L	F	N	G	E	A	E	Y	D	S	I	R	A	V	K	Q	K	V	S	I	P	V	I	A	N	G	D	I	T	D	P	L	K	A	R	A	V	L	D	Y	T	G	A	D	A	L	M	I	G	R	A	A	Q	G	R	P	W	I	F	R	E	I	Q	H	Y	L	D	T	G	E
Query Conservation						.	.	.
Alig confidence						.	.	.
Template Conservation
Template Sequence		S	S	G	A	I	V	P	A	R	M	N	V	Y	P	G	Y	Q	V	P	F	A	E	L	I	R	R	E	A	D	I	P	T	G	A	V	G	L	I	T	S	G	W	Q	A	E	E	I	L	Q	N	G	R	A	D	L	V	F	L	G	R	E	L	L	R	N	P	Y	W	P	Y	A	A	A	R	E	L	G	A	K	I
Template Known Secondary structure						S	S								T	T	T	T											T	T							S	S													T	T	S		S												T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		246	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		329	330	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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