Job Description P0ABT5 Confidence 98.04% Date Thu Jan 5 11:16:20 GMT 2012 Rank 230 Aligned Residues 207 % Identity 15% Template c3eooL_ PDB info PDB header:lyase Chain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei Resolution 2.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.											60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		R	N	R	L	I	A	A	P	M	A	G	I	T	D	R	P	F	R	T	L	C	Y	E	M	G	A	G	L	T	V	S	E	M	M	S	S	N	P	Q	V	W	E	S	D	K	S	R	L	R	M	V	.	.	.	.	.	.	.	.	.	.	H	I	D	E	P	G	I	R	T	V	Q	I	.	.	A	G	S	D	P
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence										.	.																																										.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation										.	.
Template Sequence		A	E	Q	P	L	Q	V	V	.	.	G	A	I	T	A	Y	A	A	K	M	A	E	A	V	G	F	K	A	V	Y	L	S	G	G	G	V	A	A	N	S	L	G	I	P	D	L	G	I	S	T	M	D	D	V	L	V	D	A	N	R	I	T	N	A	T	N	L	P	L	L	V	D	I	D	T	G	W	G	G	A
Template Known Secondary structure			S	S	S					.	.			S	S										T	T		S																S		S	S	S																				S							T	T		S	S	S
Template Predicted Secondary structure										.	.
Template SS confidence
		19	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		K	E	M	A	D	A	A	R	I	N	V	E	S	G	A	Q	I	I	D	I	N	M	G	C	P	A	K	K	V	N	R	K	L	A	G	S	A	L	L	Q	Y	P	D	V	V	K	S	I	L	T	E	V	V	N	A	V	D	V	P	V	T	L	K	I	R	T	.	.	G	W	A	P	E	H	R	N	C	E	E	I
Query Conservation																																																																				.	.
Alig confidence																										.																																										.	.
Template Conservation																										.
Template Sequence		F	N	I	A	R	T	I	R	S	F	I	K	A	G	V	G	A	V	H	L	E	D	Q	V	.	G	Q	K	R	C	G	H	R	P	G	K	E	C	V	P	A	G	E	M	V	D	R	I	K	A	A	V	D	A	R	T	D	E	T	F	V	I	M	A	R	T	D	A	A	A	A	E	G	I	D	A	A	I	E	R
Template Known Secondary structure														T	T		S							B		.					T	T							B																		S		T	T	S
Template Predicted Secondary structure																										.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		A	Q	L	A	E	D	C	G	I	Q	A	L	T	I	H	G	R	T	R	A	C	L	F	N	G	E	A	E	Y	D	S	I	R	A	V	K	Q	K	V	S	I	P	V	I	A	N	.	.	.	G	D	I	T	D	P	L	K	A	R	A	V	L	D	Y	T	G	A	D	A	L	M	I	G	R	A	A	Q
Query Conservation																																																.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																								.	.	.																.
Template Conservation																.	.	.	.	.	.	.	.	.																																										.
Template Sequence		A	I	A	Y	V	E	A	G	A	D	M	I	F	P	.	.	.	.	.	.	.	.	.	E	A	M	K	T	L	D	D	Y	R	R	F	K	E	A	V	K	V	P	I	L	A	N	L	T	E	F	G	S	T	P	L	F	T	L	D	E	L	K	G	A	.	N	V	D	I	A	L	Y	C	C	G	A	Y
Template Known Secondary structure									T		S					.	.	.	.	.	.	.	.	.					S													S		B						T	T	S	S	S											T	.	T								S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.																																										.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.										190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions