 |
Job Description | P0ABT5 | Confidence | 90.38% | Date | Thu Jan 5 11:16:20 GMT 2012 |
Rank | 475 | Aligned Residues | 89 |
% Identity | 22% | Template | c3cwoX_ |
PDB info |
PDB header:de novo protein | Chain: X: PDB Molecule:beta/alpha-barrel protein based on 1thf and 1tmy; |
PDBTitle: a beta/alpha-barrel built by the combination of fragments2 from different folds
|
Resolution | 3.10 Å |
|
 |
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | E | E | I | A | Q | L | A | E | D | C | G | I | Q | A | L | T | I | H | G | R | T | R | A | C | L | F | N | G | E | A | E | Y | D | S | I | R | A | V | K | Q | K | V | S | I | P | V | I | A | N | G | D | I | T | D | P | L | K | A | R | A | V | L | D | Y | T | G | A | D | A | L | M | I | G | R | A | A | Q | G | R |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|
|
|
|   |
|
|   |
|   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|
|
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
L | R | D | W | V | V | E | V | E | K | R | G | A | G | E | I | L | L | T | S | I | D | R | D | G | T | K | S | G | Y | . |
D | T | E | M | I | R | F | V | R | P | L | T | T | L | P | I | I | A | S | G | G | A | G | K | M | E | H | F | L | E | A | F | L | A | . |
G | A | D | A | A | L | A | A | S | V | F | H | F | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  | T | T | T | T | T |
|
| S |
|
| . |
|  |  |  |  |  |  |  | G | G | G |
|
| S |
|  |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  |  | . | T |
| S |  |  |  |  | S |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | |
. | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
  |
  |   |
231 | . | . | . | . | . | . | . | . | 240 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | W | I | F | R | E | I | Q | H | Y | L |
Query Conservation |   |
|   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|
Template Sequence |   |
E | I | D | V | R | E | L | K | E | Y | L |
Template Known Secondary structure |   |
S | S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
210 | . | . | . | . | . | . | . | . | . | 220 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|