Job Description P0ABT5 Confidence 99.75% Date Thu Jan 5 11:16:20 GMT 2012 Rank 53 Aligned Residues 209 % Identity 17% Template c2rduA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:hydroxyacid oxidase 1; PDBTitle: crystal structure of human glycolate oxidase in complex with2 glyoxylate Resolution 1.65 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.							.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.
Query Sequence		R	I	G	Q	Y	Q	L	R	N	R	L	I	A	A	P	M	A	G	I	T	.	.	.	.	.	.	D	R	P	F	R	T	L	C	Y	E	M	G	A	G	L	T	V	S	E	M	M	S	S	N	P	Q	V	W	E	S	D	K	S	R	L	R	M	V	H	I	D	E	P	G	I	R	T	V	Q	I	A	G	S	D
Query Conservation																						.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.
Template Sequence		S	V	L	G	Q	R	V	S	M	P	I	C	V	G	A	T	A	M	Q	R	M	A	H	V	D	G	E	L	A	T	V	R	A	C	Q	S	L	G	T	G	M	M	L	S	S	W	A	T	S	.	.	.	.	.	.	.	.	.	S	I	E	E	V	A	E	A	G	P	E	A	L	R	W	L	Q	L	Y	I	Y	K
Template Known Secondary structure				T	T				S	S	S							S		G	G	G	T	S	T	T													T							T	T		S	S	.	.	.	.	.	.	.	.	.										T	T	S									B	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.										.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		76	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																																					.	.
Predicted Secondary structure									.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	K	E	M	A	D	A	.	A	R	I	N	V	E	S	G	A	Q	I	I	D	I	N	M	G	C	P	A	K	K	V	N	R	K	L	A	G	S	A	L	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P
Query Conservation									.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	E	V	T	K	K	L	V	R	Q	A	E	K	M	G	Y	K	A	I	F	V	T	V	D	T	P	Y	L	G	N	R	L	D	D	V	R	N	R	F	K	L	P	P	Q	L	R	M	K	N	F	E	T	S	T	L	S	F	S	P	E	E	N	F	G	D	D	S	G	L	A	A	Y	V	A	K	A	I	D	P
Template Known Secondary structure		S														T	T									S		S	S											T					T	T				T	T		S	S	T	T	T	T	T		T	T	S				S	S											B		T
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		D	V	V	K	S	I	L	T	E	V	V	N	A	V	D	V	P	V	T	L	K	I	R	T	G	W	A	P	E	H	R	N	C	E	E	I	A	Q	L	A	E	D	C	G	I	Q	A	L	T	I	H	G	R	T	R	A	C	L	F	N	G	E	A	E	Y	D	S	I	R	A	V	K	Q	K	V	.	.	S	I	P
Query Conservation																																																																													.	.
Alig confidence																											.	.	.	.	.	.	.	.																																											.	.
Template Conservation																											.	.	.	.	.	.	.	.
Template Sequence		S	I	S	W	E	D	I	K	W	L	R	R	L	T	S	L	P	I	V	A	K	G	I	L	R	.	.	.	.	.	.	.	.	G	D	D	A	R	E	A	V	K	H	G	L	N	G	I	L	V	S	N	H	G	A	R	Q	L	D	G	V	P	A	T	I	D	V	L	P	E	I	V	E	A	V	E	G	K	V	E
Template Known Secondary structure		T															S									S	.	.	.	.	.	.	.	.										T	T									G	G	G	T	S	S	T	T																T	T	S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240									.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	A	N	G	D	I	T	D	P	L	K	A	R	A	V	L	D	Y	T	G	A	D	A	L	M	I	G	R	A	A	Q
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		V	F	L	D	G	G	V	R	K	G	T	D	V	L	K	A	L	A	L	.	G	A	K	A	V	F	V	G	R	P	I	V
Template Known Secondary structure						S	S			S										T	.	T		S					S
Template Predicted Secondary structure																					.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions