Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABT5
Confidence98.19%DateThu Jan 5 11:16:20 GMT 2012
Rank207Aligned Residues147
% Identity7%Templatec2pgeA_
PDB info PDB header:lyaseChain: A: PDB Molecule:menc; PDBTitle: crystal structure of menc from desulfotalea psychrophila2 lsv54
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70.........80.........90.........100.........110.........120.........130
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  SDKSRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDVVKSILTEVVN
Query Conservation                 
  


 
  
     

      
 
 



 


         
  
        


  
  
Alig confidence 
















































..................












Template Conservation    
   


     

                       
    




..................   
   
  

 
Template Sequence  QEWFASDFTRGEKRIPVNGLIWMGEAAFMQEQIEAKLAEGYGCLKLKID. . . . . . . . . . . . . . . . . . FDKECALLAGIRE
Template Known Secondary structure  S
SS
STTTTTS

B




TT
S

..................
Template Predicted Secondary structure 


















..................

Template SS confidence 















































































   138.140.........150.........160.........170.........180...... ...190.........
 
   131.... ....140.........150.........160.........170.........180.........190.........200.........
Predicted Secondary structure 



.

































Query SS confidence 




.









































































Query Sequence  AVDVP. VTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKA
Query Conservation       .  

 
                
   
   
 

 
              
  
     



 

 
 
  

Alig confidence 




.






























........


































Template Conservation    
     
 



  

   
      
    
  
........


        
  
      


 


       
Template Sequence  SFSPQQLEIRVDANGAFSPANAPQRLKRLSQFHLHSI. . . . . . . . EQPIRQHQWSEMAALCANSPLAIALDEELIGLGAE
Template Known Secondary structure  S
TTT

TTBB
TTTTT

S........

B
SS

SS
SGGGTT

T
Template Predicted Secondary structure 














........
















Template SS confidence 















































































   203......210.........220.........230......... 240.........250.........260.........270....
 
   210.. .......220...
Predicted Secondary structure  ..




Query SS confidence 


. .










Query Sequence  RAV. . LDYTGADALMI
Query Conservation     ..
   
 
 


Alig confidence 


..










Template Conservation       
     
 
 
Template Sequence  QRSAMLDAIRPQYIIL
Template Known Secondary structure 

S
Template Predicted Secondary structure 





Template SS confidence 















   275....280.........290
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions