Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABT5
Confidence98.70%DateThu Jan 5 11:16:20 GMT 2012
Rank121Aligned Residues134
% Identity16%Templatec2p88E_
PDB info PDB header:lyaseChain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme PDBTitle: crystal structure of n-succinyl arg/lys racemase from2 bacillus cereus atcc 14579
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70.........80.........90.........100.........110.........120.........130.........140.....
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  IRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTGWA
Query Conservation 
  


 
  
     

      
 
 



 


         
  
        


  
         

 
    
Alig confidence 



































................



























Template Conservation                   
      
    


 
  ................   
   
  

   
    
 



  
Template Sequence  PVTHVLSIADPENMAEEAASMIQKGYQSFKMKVGTN. . . . . . . . . . . . . . . . VKEDVKRIEAVRERVGNDIAIRVDVNQG
Template Known Secondary structure 


S

TTT



S
................TTTSS
TTT
Template Predicted Secondary structure 












................








Template SS confidence 















































































   132.......140.........150.........160....... ..170.........180.........190.....
 
   146 ...150.........160.........170.........180.........190.........200.........210.........220...
Predicted Secondary structure 
.
































Query SS confidence 
.












































































Query Sequence  P. EHRNCEEIAQLAEDCGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGADALMI
Query Conservation   .           
   
   
 

 
              
  
     



 

 
 
  

   
   
 
 


Alig confidence 
.



















........
















































Template Conservation        
      
    
  
........


    
      
     



 

           
     
 
  
Template Sequence  WKNSANTLTALRSLGHLNIDWI. . . . . . . . EQPVIADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNI
Template Known Secondary structure  TBSTSTTTT
S
........

B
TT
T

S
STT

ST

S
Template Predicted Secondary structure 





........





















Template SS confidence 














































































   196...200.........210....... ..220.........230.........240.........250.........260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions