 |
Job Description | P0ABT5 | Confidence | 97.52% | Date | Thu Jan 5 11:16:20 GMT 2012 |
Rank | 287 | Aligned Residues | 124 |
% Identity | 10% | Template | c2p0iA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:l-rhamnonate dehydratase; |
PDBTitle: crystal structure of l-rhamnonate dehydratase from gibberella zeae
|
Resolution | 2.10 Å |
|
 |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | R | I | N | V | E | S | G | A | Q | I | I | D | I | N | M | G | C | P | A | K | K | V | N | R | K | L | A | G | S | A | L | L | Q | Y | P | D | V | V | K | S | I | L | T | E | V | V | N | A | V | D | V | P | V | T | L | K | I | R | T | G | W | A | P | E | H | R | N | C | E | E | I | A | Q | L | A | E | D | C | G |
Query Conservation |   |
|   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   |   |
|   |
|
|
|   |   |   |
|   |   |   |   |
|   |
|
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
P | T | A | A | K | A | X | G | F | W | G | G | K | V | P | L | P | F | C | P | D | D | G | H | E | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | R | K | N | V | E | F | L | R | K | H | R | E | A | V | G | P | D | F | P | I | X | V | D | C | Y | X | S | L | N | V | S | Y | T | I | E | L | V | K | A | C | L | D | L | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
| S |
|  |  |  |  |
|
|
|
| G | G | G |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |
| T | T |
|
|
|  |  |  |  |  |  |  |  |  |  | T | G | G | G |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . |
  |
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | |
. | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | Q | A | L | T | I | H | G | R | T | R | A | C | L | F | N | G | E | A | E | Y | D | S | I | R | A | V | K | Q | K | . |
V | S | I | P | V | I | A | N | G | D | I | T | D | P | L | K | A | R | A | V | L | D | Y | T | G | A | D | A | L | M | I |
Query Conservation |   |
  |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   | . |   |   |
|
|
|
|   |
|
|   |
|   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
| . | . | . | . | . | . | . | . |
|
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |
Template Sequence |   |
I | N | W | W | . |
. |
. |
. |
. |
. |
. |
. |
E | E | C | L | S | P | D | D | T | D | G | F | A | L | I | K | R | A | H | P | T | V | K | F | T | T | G | E | H | E | Y | S | R | Y | G | F | R | K | L | V | E | G | R | N | L | D | I | I | Q | P |
Template Known Secondary structure |   |
| S |
|  | . | . | . | . | . | . | . | . |  |
|
| S |
| T | T |
| T | T |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  | T | T |
|
|
| S |  |  |
|
|
Template Predicted Secondary structure |   |
|  |  |  | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
243 | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|