Job Description P0ABT5 Confidence 97.72% Date Thu Jan 5 11:16:20 GMT 2012 Rank 267 Aligned Residues 192 % Identity 13% Template c2ehhE_ PDB info PDB header:lyase Chain: E: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 aquifex aeolicus Resolution 1.90 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	K	E	M	A	D	A	A	R	I	N	V	E	S	G	A	Q	I	I	D	I	N	M	G	C	P	A	K	K	V	N	R	K	L	A	G	S	A	L	L	Q	Y	P	D	V	V	K	S	I	L	T	E	V	V	N	A	V	D	V	P	V	T	L	K	I	R	T	G	W	A	P	E	H	R	N	C	E	E	I
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.																																							.
Template Conservation																									.	.	.	.	.	.	.	.	.	.																																							.
Template Sequence		D	Y	E	A	L	G	N	L	I	E	F	H	V	D	N	G	T	D	A	I	L	V	C	.	.	.	.	.	.	.	.	.	.	G	T	T	G	E	S	P	T	L	T	F	E	E	H	E	K	V	I	E	F	A	V	K	R	A	A	G	R	I	K	V	I	A	G	T	G	G	N	.	A	T	H	E	A	V	H	L
Template Known Secondary structure															T	T	T		S					S	.	.	.	.	.	.	.	.	.	.	S	T	T	T	T	G	G	G	S																	T	T	S	S									S	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																																							.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.											.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.							200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	L	A	E	D	C	G	I	Q	A	L	T	I	H	G	R	T	R	A	C	L	F	N	G	E	A	E	Y	D	S	I	R	A	V	K	Q	K	V	S	I	P	V	I	A	.	.	.	.	.	.	N	G	D	I	T	D	P	L	K	A	R	A	V	L	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																															.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.																										.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.
Template Sequence		T	A	H	A	K	E	V	G	A	D	G	A	L	V	V	V	P	Y	Y	.	N	K	P	T	Q	R	G	L	Y	E	H	F	K	T	V	A	Q	E	V	D	I	P	I	I	I	Y	N	I	P	S	R	T	C	V	E	I	S	V	D	T	M	F	K	L	A	S	E	C	E	N	I	V	A	S	K	E	S	T	P	N
Template Known Secondary structure								T	T		S									S	.	S																				S												S																T	T									S
Template Predicted Secondary structure																					.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
																																216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	A	D	A	L	M	I	G	R	A	A	Q	G	R	P	W	I	F	R	E	I	Q	H	Y	L	D	T	G	E	L	L	P	P	L	P	L	A	E	V	K	R	L	L	C	A	H	V	R	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																.	.	.	.	.	.	.
Template Conservation																																														.																.	.	.	.	.	.	.
Template Sequence		M	D	R	I	S	E	I	V	K	R	L	G	E	S	F	S	V	L	S	G	D	D	S	L	T	L	P	M	M	A	L	G	A	K	G	V	I	S	V	A	N	N	V	M	.	P	R	E	V	K	E	L	I	R	A	A	L	E	G	D	.	.	.	.	.	.	.	F	R	R	A	R	E	I	H	Y	Y	L	H	D
Template Known Secondary structure												S		T	T						S		G	G	G							T	T							S	G	G	G	T		.													T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.																.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.								.	.	.	.	230	.	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	D	F	Y	G	P	A	K	G	Y	R	I	A	R	K	H	V	S	W	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	K	V	L	F	I	E	T	N	P	I	P	V	K	T	A	C	W	M	L
Template Known Secondary structure						T	T	S	S	S	T	T										T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions