Job Description P0ABT5 Confidence 88.73% Date Thu Jan 5 11:16:20 GMT 2012 Rank 489 Aligned Residues 143 % Identity 16% Template c2d69B_ PDB info PDB header:lyase Chain: B: PDB Molecule:ribulose bisphosphate carboxylase; PDBTitle: crystal structure of the complex of sulfate ion and octameric2 ribulose-1,5-bisphosphate carboxylase/oxygenase (rubisco) from3 pyrococcus horikoshii ot3 (form-2 crystal) Resolution 1.90 Å

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		63	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.																									.	.
Query SS confidence												.	.	.	.																									.	.
Query Sequence		E	P	G	I	R	T	V	Q	I	A	.	.	.	.	G	S	D	P	K	E	M	A	D	A	A	R	I	N	V	E	S	G	A	Q	I	I	D	I	.	.	N	M	G	C	P	A	K	K	V	N	R	K	L	A	G	S	A	L	L	Q	Y	P	D	V	V	K	S	I	L	T	E	V	V	N	A	V	D	V	P	V
Query Conservation												.	.	.	.																									.	.
Alig confidence												.	.	.	.																									.	.									.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.
Template Sequence		K	D	R	P	L	T	A	T	V	P	K	P	K	M	G	W	S	V	E	E	Y	A	E	I	A	Y	E	L	W	S	G	G	I	D	L	L	K	D	D	E	N	F	T	S	F	P	F	N	.	.	.	.	.	.	.	.	R	F	E	E	R	V	R	K	L	Y	R	V	R	D	R	V	E	A	E	T	G	E	T	K
Template Known Secondary structure			S	S								S	S	S	S																		T		S						T	T				B	T	T	B	.	.	.	.	.	.	.	.																					S	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.									.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200													.
Predicted Secondary structure																																																								.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	K	I	R	T	G	W	A	P	E	H	R	N	C	E	E	I	A	Q	L	A	E	D	C	G	I	Q	A	L	T	I	H	G	R	T	R	A	C	L	F	N	G	E	A	E	Y	D	S	I	R	A	V	K	.	.	.	Q	K	V	S	I	P	V	I	A	N	.	.	.	.	.	.	.	.	.	.	.	.	G
Query Conservation																																																								.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																											.	.	.	.	.	.	.	.											.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.																											.	.	.	.	.	.	.	.
Template Sequence		E	Y	L	I	N	I	T	G	.	.	P	V	N	I	M	E	K	R	A	E	M	V	A	N	E	G	G	Q	Y	V	M	I	D	I	V	V	.	.	.	.	.	.	.	.	A	G	W	S	A	L	Q	Y	M	R	E	V	T	E	D	L	G	L	A	I	H	A	H	R	A	M	H	A	A	F	T	R	N	P	R	H
Template Known Secondary structure						B			S	.	.	S														T	T											.	.	.	.	.	.	.	.																	T								T	T	T					S		T	T	S
Template Predicted Secondary structure										.	.																											.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.									.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	T	D	P	L	K	A	R	A	V	L	D	Y	T	G	A	D	A	L	M	I	G
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		G	I	.	T	M	L	A	L	A	K	A	A	R	M	I	G	V	D	Q	I	H	T	G
Template Known Secondary structure				.													T		S
Template Predicted Secondary structure				.
Template SS confidence
		292	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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