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Job DescriptionP0ABT5
Confidence99.83%DateThu Jan 5 11:16:20 GMT 2012
Rank40Aligned Residues208
% Identity14%Templatec2a7nA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l(+)-mandelate dehydrogenase; PDBTitle: crystal structure of the g81a mutant of the active chimera of (s)-2 mandelate dehydrogenase
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20. ........30.........40.........50.........60.........70.....
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Query Sequence  RIGQYQLRNRLIAAPMAGIT. . . . . . DRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVHIDEPGIRTVQIAGSD
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Template Sequence  EVLGKRQSMPLLIGPTALNGALWPKGDLALARAATKAGIPFVLSTA. . . . . . . . . SNMSIEDLARQ. CDGDLWFQLYVIH
Template Known Secondary structure  TTSSS


S
GGGTSTTT


TT.........
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   65....70.........80.........90.........100.........110 .........120. ........130....
 
   76...80.........90.........100.........110...... ...120..
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Query Sequence  PKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YPDVVK
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Template Sequence  REIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNW
Template Known Secondary structure  TT


S
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T



TT


GGGTT


S

SSTTTTSS


TT

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   135....140.........150.........160.........170.........180.........190.........200.........210....
 
   123......130.........140.........150.........160.........170.........180.........190.........200..
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Query Sequence  SILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGD
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Template Sequence  EALRWLRDLWPHKLLVKGLLS. . . . . . . . AEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGKPVLIDSG
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S
S........TT
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GGGTS
TT


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   215....220.........230..... ....240.........250.........260.........270.........280......
 
   203......210.........220........
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Query Sequence  ITDPLKARAVLDYTGADALMIGRAAQ
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Template Sequence  FRRGSDIVKALAL. GAEAVLLGRATL
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ST.T
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   287..290......... 300.........310.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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