Job Description P25534 Confidence 99.70% Date Thu Jan 5 11:42:01 GMT 2012 Rank 34 Aligned Residues 288 % Identity 14% Template c3qj4A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:renalase; PDBTitle: crystal structure of human renalase (isoform 1) Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.													50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																												.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	V	I	I	V	G	G	G	M	A	G	A	T	L	A	L	A	I	S	R	L	S	H	G	A	.	.	L	P	V	H	L	I	E	A	T	A	P	E	S	H	A	H	P	G	F	D	G	R	A	.	.	.	.	.	.	.	.	.	.	.	.	I	A	L	A	A	G	T	C	Q	Q	L	A	R	I	G	V	W
Query Conservation																												.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.			.	.																								.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																							.	.	.																																																						.	.
Template Sequence		A	Q	V	L	I	V	G	A	G	M	T	G	S	L	C	A	A	L	L	R	R	.	.	.	Q	T	G	P	L	Y	L	A	V	W	D	K	A	D	D	S	G	G	R	M	T	T	A	C	S	P	H	N	P	Q	C	T	A	D	L	G	A	Q	Y	I	T	C	T	P	H	Y	A	K	K	H	Q	R	F	.	.	Y
Template Known Secondary structure										S												S	.	.	.												S	S	S	S	S		G	G	G						S	S		T	T					S	S								S	S					T				.	.
Template Predicted Secondary structure																							.	.	.																																																						.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	L	A	D	C	A	T	A	I	T	T	V	H	V	S	D	R	G	H	A	G	F	V	T	L	A	A	E	D	Y	Q	L	A	A	L	G	Q	V	V	E	L	H	N	V	G	Q	R	L	F	A	L	L	R	K	A	P	G	V	T	L	H	C	P	D	R	V	A	N	V	A	R	T	Q	S	H	V	E	V	T
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Sequence		D	E	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	G	V	L	R	P	L	S	S	P	I	E	G	M	V	M	G	D	C	N	F	V	A	P	Q	G	I	S	S	I	I	K	H	Y	L	K	E	S	.	G	A	E	V	Y	F	R	H	R	V	T	Q	I	N	L	R	D	D	K	W	E	V	S
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S						S				T											T	T		T	T											.	T					S	S										S	S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template SS confidence
		78	.	80	.														.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.												170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.																																														.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.																																														.
Query Sequence		L	E	S	G	E	T	L	T	G	R	V	L	V	A	A	D	G	T	H	S	A	L	A	.	.	.	.	.	.	.	.	.	.	.	T	A	C	G	V	D	W	Q	Q	E	P	Y	E	Q	L	A	V	I	A	N	V	A	T	S	V	A	H	E	G	R	A	F	E	R	F	T	Q	H	G	P	L	A	M	L	P	.
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.																																														.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.																																														.
Template Conservation
Template Sequence		K	Q	T	G	S	P	E	Q	F	D	L	I	V	L	T	M	P	V	P	E	I	L	Q	L	Q	G	D	I	T	T	L	I	S	E	C	Q	R	Q	Q	L	E	A	V	S	Y	S	S	R	Y	A	L	G	L	F	Y	E	A	G	T	D	V	P	W	A	G	Q	Y	I	T	S	N	P	C	I	R	F	V	S	I	D
Template Known Secondary structure			S	S	S						S						S						T	T		B	S	T					S										T			B											S	S					S		S					S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
								215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.												.	270	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	M	S	D	G	R	C	S	L	V	W	C	H	P	L	E	R	R	E	E	V	L	S	W	S	D	E	K	F	C	R	E	L	Q	S	A	F	G	W	R	L	G	K	I	T	H	A	G	K	R	S	A	Y	P	L	.	.	.	.	.	.	.	.	.	.	.	A	L	T	H	A	A	R	S	I
Query Conservation		.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	K	K	R	N	I	E	S	S	I	G	P	S	L	V	I	H	T	T	V	P	F	G	V	T	Y	L	E	H	S	I	E	D	V	Q	E	L	V	F	Q	Q	L	E	N	I	L	P	G	L	P	Q	P	I	A	T	K	C	Q	K	W	R	H	S	Q	V	T	N	A	A	A	N	C	P	G	Q	M	T	L	H	H
Template Known Secondary structure					T	T																					T	T	T	S																	S		S					S								T	T		S	B	S	S			S	S	S		S						T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	R	T	V	L	V	G	N	A	A	Q	T	L	H	P	I	A	G	Q	G	F	N	L	G	M	R	D	V	M	S	L	A	E	T	L
Query Conservation
Alig confidence														.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.
Template Sequence		K	P	F	L	A	C	G	G	D	G	F	T	.	.	.	.	.	.	Q	S	N	F	D	G	C	I	T	S	A	L	C	V	L	E	A	L
Template Known Secondary structure		T	T						S	G	G	G	S	.	.	.	.	.	.		S	S
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320							.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions