Job Description P25534 Confidence 99.29% Date Thu Jan 5 11:42:01 GMT 2012 Rank 59 Aligned Residues 152 % Identity 19% Template c3cp8C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:trna uridine 5-carboxymethylaminomethyl PDBTitle: crystal structure of gida from chlorobium tepidum Resolution 3.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		M	S	V	I	I	V	G	G	G	M	A	G	A	T	L	A	L	A	I	S	R	L	S	H	G	A	L	P	V	H	L	I	E	A	T	A	P	E	S	H	A	H	P	G	F	D	G	R	A	I	A	L	A	A	G	T	C	Q	Q	L	A	R	I	G	.	.	V	W	Q	S	L	A	D	C	A	T	A	I	T	T
Query Conservation																																																																		.	.
Alig confidence																							.	.	.																																									.	.									.	.	.	.	.
Template Conservation																							.	.	.																																																			.	.	.	.	.
Template Sequence		Y	D	V	I	V	V	G	A	G	H	A	G	C	E	A	A	L	A	V	A	R	.	.	.	G	G	L	H	C	L	L	I	T	S	D	L	S	A	V	A	R	M	S	C	N	P	A	I	G	G	V	A	K	G	Q	I	T	R	E	I	D	A	L	G	G	E	M	G	K	A	I	D	A	T	.	.	.	.	.	G
Template Known Secondary structure										S													.	.	.	T	T								S		G	G	G	T	T			S	S		S					T	T												T		S									.	.	.	.	.
Template Predicted Secondary structure																							.	.	.																																																			.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	V	S	D	R	G	H	A	G	F	V	T	L	A	A	E	D	Y	Q	L	A	A	L	G	Q	V	V	E	L	H	N	V	G	Q	R	L	F	A	L	L	R	K	A	P	G	V	T	L	H	C	P	D	R	V	A	N	V	A	R	T	Q	S	H	V	E	V	T	L	E	S	G	E	T	L	T	G	R	V	L
Query Conservation
Alig confidence										.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.
Template Sequence		I	Q	F	R	M	L	N	R	.	.	.	.	.	.	.	S	K	G	P	A	M	H	S	P	R	A	Q	A	D	K	T	Q	Y	S	L	Y	M	R	R	I	V	E	H	E	P	N	I	D	L	L	Q	D	T	V	I	G	V	S	A	N	S	G	K	F	S	S	V	T	V	R	S	G	R	A	I	Q	A	K	A	A
Template Known Secondary structure									S	.	.	.	.	.	.	.	S	S		T	T	T																						T		T	T															T	T								T	T	S
Template Predicted Secondary structure										.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.								.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	D	G	T	H	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	A	C	G	T	F	L	N
Template Known Secondary structure						T	T		B	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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