Job Description P25534 Confidence 99.52% Date Thu Jan 5 11:42:01 GMT 2012 Rank 40 Aligned Residues 304 % Identity 15% Template c3bhkA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:monomeric sarcosine oxidase; PDBTitle: crystal structure of r49k mutant of monomeric sarcosine oxidase2 crystallized in phosphate as precipitant Resolution 1.71 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.													.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	V	I	I	V	G	G	G	M	A	G	A	T	L	A	L	A	I	S	R	L	S	H	G	A	L	P	V	H	L	I	E	A	T	A	P	E	S	H	A	H	P	G	F	D	G	R	A	I	A	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A	G	T	C	Q	Q	L	A	R	I	G	V	W	Q	S
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																							.	.	.																																																				.	.
Template Sequence		F	D	V	I	V	V	G	A	G	S	M	G	M	A	A	G	Y	Q	L	A	K	.	.	.	Q	G	V	K	T	L	L	V	D	A	F	D	P	P	H	T	N	G	S	H	H	G	D	T	K	I	I	R	H	A	Y	G	E	G	R	E	Y	V	P	L	A	L	R	S	Q	E	L	W	Y	E	L	.	.	E	K	E
Template Known Secondary structure										S													.	.	.	T	T								S	S		S	S		S	S	S	S	S		S	S						S	S		T	T		G	G	G															.	.
Template Predicted Secondary structure																							.	.	.																																																				.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.																																.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	D	C	A	T	A	I	T	T	V	H	V	S	D	R	G	H	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	T	L	A	A	E	D	Y	Q	L	A	A	L	G	Q	V	V	E	L	H	N	V	G	Q	R	L	F	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	H	H	K	I	F	T	K	T	G	V	L	V	F	G	P	K	G	E	S	A	F	V	A	E	T	M	E	A	A	K	E	H	S	L	T	V	D	L	L	E	G	D	E	I	N	K	R	W	P	G	I	T	V	P	E	N	Y	N	A	I	F	E	P	N	S	G	V	L	F	S	E	N	C	I	R	A	Y	R	E
Template Known Secondary structure			S	S														T	T	S														T	T								T							S	T	T					T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.
Predicted Secondary structure																																																																												.	.	.
Query SS confidence																																																																												.	.	.
Query Sequence		L	L	R	K	A	P	G	V	T	L	H	C	P	D	R	V	A	N	V	A	R	T	Q	S	H	V	E	V	T	L	E	S	G	E	T	L	T	G	R	V	L	V	A	A	D	G	T	H	S	A	L	A	T	A	C	G	V	D	W	Q	Q	E	P	Y	E	Q	L	A	V	I	A	N	V	A	.	.	.	T	S	V
Query Conservation																																																																												.	.	.
Alig confidence							.																																																																					.	.	.
Template Conservation							.
Template Sequence		L	A	E	A	R	.	G	A	K	V	L	T	H	T	R	V	E	D	F	D	I	S	P	D	S	V	K	I	E	T	A	N	G	S	Y	T	A	D	K	L	I	V	S	M	G	A	W	N	S	K	L	L	S	K	L	N	L	D	I	P	L	Q	P	Y	R	Q	V	V	G	F	F	E	S	D	E	S	K	Y	S	N
Template Known Secondary structure						T	.	T						S										T	T							T	T													G	G	G					G	G	G	G	T																							B	G
Template Predicted Secondary structure							.
Template SS confidence
		159	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.						.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.
Query SS confidence																																				.	.	.	.	.
Query Sequence		A	H	E	G	R	A	F	E	R	F	T	Q	H	G	P	L	A	M	L	P	M	S	D	G	R	C	S	L	V	W	C	H	P	L	.	.	.	.	.	E	R	R	E	E	V	L	S	W	S	D	E	K	F	C	R	E	L	Q	S	A	F	G	W	R	L	G	K	I	T	H	A	G	K	R	S	A	Y	P	L	A
Query Conservation																																				.	.	.	.	.
Alig confidence																																				.	.	.	.	.
Template Conservation
Template Sequence		D	I	D	F	P	G	F	M	V	E	V	P	N	G	I	Y	Y	G	F	P	S	F	G	G	C	G	L	K	L	G	Y	H	T	F	G	Q	K	I	D	P	D	T	I	N	R	E	F	G	V	Y	P	E	D	E	S	N	L	R	A	F	L	E	E	Y	M	P	G	A	N	G	E	L	K	R	G	A	V	C	M	Y
Template Known Secondary structure		G	G	T									T	T								B	S	T	T								S	S							T	T	T					T	T	S	S																G	G	G
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290						.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		L	T	H	A	A	R	S	I	T	H	R	T	V	L	V	G	N	A	A	Q	T	.	.	.	.	.	L	H	P	I	A	G	Q	G	F	N	L	G	M	R	D	V	M	S	L	A	E	T	L	T	Q
Query Conservation																							.	.	.	.	.
Alig confidence		.	.	.	.	.																	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	T	K	T	L	D	E	H	F	I	I	D	L	H	P	E	H	S	N	V	V	I	A	A	G	F	S	G	H	G	F	K	F	S	S	G	V	G	E	V	L	S	Q	L	A	L	T
Template Known Secondary structure		.	.	.	.	.				T	T	S								T	T											T	T			G	G	G
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions