Job Description P25534 Confidence 99.35% Date Thu Jan 5 11:42:01 GMT 2012 Rank 54 Aligned Residues 153 % Identity 14% Template c2zxiC_ PDB info PDB header:fad-binding protein Chain: C: PDB Molecule:trna uridine 5-carboxymethylaminomethyl PDBTitle: structure of aquifex aeolicus gida in the form ii crystal Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	V	I	I	V	G	G	G	M	A	G	A	T	L	A	L	A	I	S	R	L	S	H	G	A	L	P	V	H	L	I	E	A	T	A	P	E	S	H	A	H	P	G	F	D	G	R	A	I	A	L	A	A	G	T	C	Q	Q	L	A	R	I	G	V	W	Q	S	L	A	D	C	A	T	A	I	T	T	V	H
Query Conservation
Alig confidence																							.	.	.																																																	.	.	.
Template Conservation																							.	.	.																																																	.	.	.
Template Sequence		F	D	V	V	V	I	G	G	G	H	A	G	I	E	A	A	L	A	A	A	R	.	.	.	M	G	A	K	T	A	M	F	V	L	N	A	D	T	I	G	Q	M	S	C	N	P	A	I	G	G	I	A	K	G	I	V	V	R	E	I	D	A	L	G	G	E	M	G	K	A	I	D	.	.	.	Q	T	G	I	Q
Template Known Secondary structure			S						S	S													.	.	.	T	T								S		G	G	G	T	T				S		S					T	T												T		S							.	.	.
Template Predicted Secondary structure																							.	.	.																																																	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	D	R	G	H	A	G	F	V	T	L	A	A	E	D	Y	Q	L	A	A	L	G	Q	V	V	E	L	H	N	V	G	Q	R	L	F	A	L	L	R	K	A	P	G	V	T	L	H	C	P	D	R	V	A	N	V	A	R	T	Q	S	H	V	E	V	T	L	E	S	G	E	T	L	T	G	R	V	L	V	A
Query Conservation
Alig confidence								.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.
Template Sequence		F	K	M	L	N	T	.	.	.	.	.	.	.	R	K	G	K	A	V	Q	S	P	R	A	Q	A	D	K	K	R	Y	R	E	Y	M	K	K	V	C	E	N	Q	E	N	L	Y	I	K	Q	E	E	V	V	D	I	I	V	K	N	N	Q	V	V	G	V	R	T	N	L	G	V	E	Y	K	T	K	A	V	V	V
Template Known Secondary structure						S	T	.	.	.	.	.	.	.	T	S		G	G	G																							S	T	T						S								S	S	S	B							T	T	S						S
Template Predicted Secondary structure								.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.								.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		161	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	G	T	H	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	G	T	F	L
Template Known Secondary structure				T	T		B
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions