Job Description P25534 Confidence 99.97% Date Thu Jan 5 11:42:01 GMT 2012 Rank 28 Aligned Residues 340 % Identity 16% Template c2pyxA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:tryptophan halogenase; PDBTitle: crystal structure of tryptophan halogenase (yp_750003.1) from2 shewanella frigidimarina ncimb 400 at 1.50 a resolution Resolution 1.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.										.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																																														.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.																																														.	.	.
Query Sequence		S	V	I	I	V	G	G	G	M	A	G	A	T	L	A	L	A	I	S	R	L	S	H	.	.	.	.	.	.	.	.	.	G	A	L	P	V	H	L	I	E	A	T	A	P	E	S	H	A	H	P	G	F	D	G	R	A	I	A	L	A	A	G	T	C	Q	Q	L	A	R	I	G	V	W	Q	S	L	.	.	.
Query Conservation																									.	.	.	.	.	.	.	.	.																																														.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.																				.	.	.
Template Conservation																																																						.	.	.	.	.	.
Template Sequence		E	I	I	I	V	G	G	G	T	A	G	W	I	T	A	G	L	L	A	A	E	H	N	V	D	K	G	V	L	A	H	S	P	K	L	N	I	T	L	I	E	S	P	D	V	A	T	I	G	V	G	E	.	.	.	.	.	.	G	T	W	P	S	X	R	S	T	L	S	K	I	G	I	D	E	N	D	F	I	R
Template Known Secondary structure																											T	T				S	S		S									S	S						S			.	.	.	.	.	.				T										T
Template Predicted Secondary structure																																																						.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.							60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.																																																						.	90	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	C	A	T	A	I	T	T	V	H	V	S	D	R	G	H	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	T	L	A	A	E	D
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	C	D	A	S	F	K	Q	G	S	R	F	I	N	W	C	K	D	P	Q	S	N	V	A	D	S	Y	L	H	P	F	S	L	P	H	G	H	Q	E	L	D	L	C	P	Y	W	L	P	H	A	E	Q	V	S	F	A	E	A	V	C	S	Q	Q	V	L	T	Q	L	G	L	A	P	K	S	I	V	T	A	Q	Y
Template Known Secondary structure			T	T											S		S	S			B	T	T	B								S	S			T	T	T	T	T								G	G	G	T	T	T	S								S							T	T	B		S	S		T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		Y	Q	L	A	A	L	G	Q	V	V	E	L	H	N	V	G	Q	R	L	F	A	L	L	R	K	A	P	G	V	T	L	H	C	P	D	R	V	A	N	V	A	R	T	.	Q	S	H	V	E	V	T	L	E	S	G	E	T	L	T	G	R	V	L	V	A	A	D	G	T	H	S	A	L	A	T	A	C	G	V	D
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		H	F	Q	N	N	Y	G	Y	H	L	N	A	A	K	F	S	Q	L	L	T	E	H	C	T	Q	K	L	G	V	T	H	I	R	D	H	V	S	Q	I	I	N	N	Q	H	G	D	I	E	K	L	I	T	K	Q	N	G	E	I	S	G	Q	L	F	I	D	C	T	G	A	K	S	L	L	L	G	E	H	L	Q	V
Template Known Secondary structure				S	S																						T	S																T	T	S								S	S	S						S						S	G	G	G								T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		176	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.				.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.																		.	.	.
Query SS confidence								.	.	.	.																		.	.	.
Query Sequence		W	Q	Q	E	P	Y	.	.	.	.	E	Q	L	A	V	I	A	N	V	A	T	S	V	A	H	E	G	.	.	.	R	A	F	E	R	F	T	Q	H	G	P	L	A	M	L	P	M	S	D	G	R	C	S	L	V	W	C	H	P	L	E	R	R	E	E	V	L	S	W	S	D	E	K	F	C	R	E	L	Q	S
Query Conservation								.	.	.	.																		.	.	.
Alig confidence								.	.	.	.																		.	.	.																																.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.
Template Sequence		P	F	L	S	Q	K	S	V	L	F	N	D	R	A	L	A	I	Q	V	P	Y	S	D	A	N	S	P	I	A	S	C	T	H	S	T	A	Q	P	N	G	W	I	W	D	I	G	L	P	T	R	K	G	V	G	Y	V	Y	S	S	S	H	.	.	.	.	.	.	.	T	N	D	I	D	A	Q	K	T	L	F	N
Template Known Secondary structure																							S	S	T	T					S	S							T	T									S	S										T	T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.								.	.	.	.	.	.	.	310	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	G	W	R	L	G	K	I	T	H	A	G	K	R	S	A	Y	P	L	A	L	T	H	A	A	R	S	I	T	H	R	T	V	L	V	G	N	A	A	Q	T	L	H	P	I	A	G	Q	G	F	N	L	G	M	R	D	V	M	S	L	A	E	T	L	T	Q	A	Q	E	R	G	E	D	M	G	D	Y	G	V
Query Conservation
Alig confidence																	.																																																								.	.	.	.	.
Template Conservation																	.																																																								.	.	.	.	.
Template Sequence		Y	L	G	V	D	G	A	A	A	D	K	L	E	P	R	.	Q	L	A	I	N	P	G	Y	R	A	K	C	W	Q	N	N	C	I	A	I	G	X	A	A	G	F	I	E	P	L	E	A	S	A	L	A	L	I	E	W	T	A	S	T	L	A	Q	Q	L	P	P	N	R	X	V	.	.	.	.	.	X	D	T	I
Template Known Secondary structure				T													.										S		S			T	T					G	G	G	T						T	T																	T			S					.	.	.	.	.
Template Predicted Secondary structure																	.																																																								.	.	.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.						.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	R	Y	Q	Q	R	R	Q	S	D	R	E	A	T	I	G	V	T	D	S	L	V	H	L	F	A	N	R	W	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	R	V	N	E	R	Y	Q	Q	H	W	Q	Q	I	I	D	F	L	K	L	H	Y	V	I	S	Q	R	Q	E	D	R
Template Known Secondary structure																										T					S	S
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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