Job Description P25534 Confidence 100.00% Date Thu Jan 5 11:42:01 GMT 2012 Rank 23 Aligned Residues 297 % Identity 14% Template c2bryA_ PDB info PDB header:transport Chain: A: PDB Molecule:nedd9 interacting protein with calponin homology PDBTitle: crystal structure of the native monooxygenase domain of2 mical at 1.45 a resolution Resolution 1.45 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	I	I	V	G	G	G	M	A	G	A	T	L	A	L	A	I	S	R	L	S	H	G	A	L	P	V	H	L	I	E	A	T	A	P	E	S	H	A	H	P	G	F	D	G	R	A	I	A	L	A	A	G	T	C	Q	Q	L	A	R	I	G	V	W	Q	S	L	A	D	C	A	T	A	I	T	T	V	H	V
Query Conservation
Alig confidence																						.	.	.													.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation																						.	.	.													.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Sequence		K	C	L	V	V	G	A	G	P	C	G	L	R	A	A	V	E	L	A	L	.	.	.	L	G	A	R	V	V	L	V	E	K	R	I	.	.	.	.	.	.	.	.	K	F	S	R	H	N	V	L	H	L	W	P	F	T	I	H	D	L	R	A	L	G	A	K	K	F	Y	G	R	F	C	.	.	.	.	.	.
Template Known Secondary structure									S													.	.	.	T	T								S		S	.	.	.	.	.	.	.	.	S																			T	T	T						T	T	T	T	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.													.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.									.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.									.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.
Query Sequence		S	D	R	G	H	A	G	F	V	T	L	A	A	E	D	Y	Q	L	A	A	L	G	Q	V	V	E	L	H	N	V	G	Q	R	L	F	A	L	L	R	K	A	P	G	V	T	L	H	C	P	D	R	V	A	N	V	A	R	T	Q	S	H	V	E	.	.	.	.	.	.	.	.	V	T	L	E	S	G	E	T	L
Query Conservation																																																																	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.																						.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	T	L	D	H	I	S	I	R	Q	L	Q	L	L	L	L	K	V	A	L	L	L	.	G	V	E	I	H	W	G	V	K	F	T	G	L	Q	P	P	P	R	K	G	S	G	W	R	A	Q	L	Q	P	N	P	P	A	Q	L	A	S	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T																				T	.	T						S											S	T	T			B						S								T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
																				149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.													.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	R	V	L	V	A	A	D	G	T	H	S	A	L	A	T	A	C	G	V	D	W	Q	Q	E	P	Y	E	Q	L	A	V	I	A	N	V	A	T	S	V	A	H	E	G	R	A	F	E	R	F	T	.	.	.	.	.	.	.	.	.	.	.	.	Q	H	G	P	L	A	M	L	P	M	S	D	G	R	C	S
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	F	D	V	L	I	S	A	A	G	G	K	F	V	P	E	G	F	T	I	R	E	M	R	G	K	L	A	I	G	I	T	A	N	F	V	N	G	R	T	V	E	E	T	Q	V	P	E	I	S	G	Y	N	Q	K	F	F	Q	S	L	L	K	A	T	G	I	D	L	E	N	I	V	Y	Y	K	D	E	T	H	Y
Template Known Secondary structure			B	S								T	T				T	T									S																			T	S			B					S	S																					S	S
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.																	.	.	.	.	240	.	.	.	.	.	.	.	.																			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	W	C	H	P	L	E	R	R	E	E	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	S	D	E	K	F	C	R	E	L	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	G	W	R	L	G	K	I	T	H	A	G	K	R	S	A	Y	P
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	V	M	T	A	K	K	Q	C	L	L	R	L	G	V	L	R	Q	D	L	S	E	T	D	Q	L	L	G	K	A	N	V	V	P	E	A	L	Q	R	F	A	R	A	A	A	D	F	A	T	H	G	K	L	G	K	L	E	F	A	Q	D	A	R	G	R	P	D	V	A	A	F	D	F	T	S	M	M	R	A	E
Template Known Secondary structure														T	T	S	B	S	S			S	S					T	S	T	T	T	B																	T	T	T	T	T		S			B		B		T	T	S	S	B								S						S
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		L	A	L	T	H	A	A	R	S	I	T	H	.	R	T	V	L	V	G	N	A	A	Q	T	L	H	P	I	A	G	Q	G	F	N	L	G	M	R	D	V	M	S	L	A	E	T	L	T	Q	A	Q	E	R	G	E	D	M	G	D	Y	G	V	L	C	R	Y	Q	Q	R	R	Q
Query Conservation														.
Alig confidence														.																																											.	.	.
Template Conservation																																																									.	.	.
Template Sequence		S	S	A	R	V	Q	E	K	H	G	A	R	L	L	L	G	L	V	G	D	C	L	V	E	P	F	W	P	L	G	T	G	V	A	R	G	F	L	A	A	F	D	A	A	W	M	V	K	R	W	A	E	G	A	G	.	.	.	P	L	E	V	L	A	E	R	E	S	L	Y	Q
Template Known Secondary structure			S							T	T									G	G	G	T	B				G	G	G																							T	T			.	.	.													T
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.				.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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