Job Description P25534 Confidence 99.29% Date Thu Jan 5 11:42:01 GMT 2012 Rank 60 Aligned Residues 294 % Identity 14% Template c1c0iA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-amino acid oxidase; PDBTitle: crystal structure of d-amino acid oxidase in complex with2 two anthranylate molecules Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.															.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	I	I	V	G	G	G	M	A	G	A	T	L	A	L	A	I	S	R	L	S	H	G	A	L	P	V	H	L	I	E	A	T	A	P	E	S	H	A	H	P	G	F	D	G	R	A	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A	G	T	C	Q	Q	L	A	R	I	G	V	W	Q
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																						.	.	.																																																						.	.
Template Sequence		R	V	V	V	L	G	S	G	V	I	G	L	S	S	A	L	I	L	A	R	.	.	.	K	G	Y	S	V	H	I	L	A	R	D	L	P	E	D	V	S	S	Q	T	F	A	S	P	W	A	G	A	N	W	T	P	F	M	T	L	T	D	G	P	R	Q	A	K	W	E	E	S	T	F	K	K	W	.	.	V	E
Template Known Secondary structure									S													.	.	.	T	T								S	S		T	T		T	T		T	T	S	S	G	G	G				B					S		T	T	T																.	.
Template Predicted Secondary structure																						.	.	.																																																						.	.
Template SS confidence
		1006	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.				.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.			.	1080
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	A	D	C	A	T	A	I	T	T	V	H	V	S	D	R	G	H	A	G	F	V	T	L	A	A	E	D	Y	Q	L	A	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	V	V	E	L	H	N	V	G	Q	R	L	F	A	L	L	R	K	A	P	G	V	T	L	H	C
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																																																											.
Template Sequence		L	V	P	T	G	H	A	M	W	L	K	G	T	R	R	F	A	Q	N	E	D	G	L	L	G	H	W	Y	K	D	I	T	P	N	Y	R	P	L	P	S	S	E	C	P	P	G	A	I	G	V	T	Y	D	T	L	S	V	H	A	P	K	Y	C	Q	Y	L	A	R	E	L	Q	K	L	.	G	A	T	F	E	R
Template Known Secondary structure			T	T	T	T	S	S											S	S	G	G	G	G	G	G	G	T	T	T	T	T	S	T	T						G	G	G	S		T	T																											T	.	T
Template Predicted Secondary structure																																																																											.
Template SS confidence
		1081	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.		.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	R	V	A	N	V	A	R	T	Q	S	H	V	E	V	T	L	E	S	G	E	T	L	T	G	R	V	L	V	A	A	D	G	T	H	S	A	L	A	T	A	C	G	V	D	W	Q	Q	E	P	Y	E	Q	L	A	V	I	A	N	V	A	T	S	V	A	H	E	G	R	A	F	E	R	F	T	Q	H	G	P
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Sequence		R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	S	L	E	Q	A	F	D	G	A	D	L	V	V	N	A	T	G	L	G	A	K	.	.	.	.	.	S	I	A	G	I	D	D	Q	A	A	E	P	I	R	G	Q	T	V	L	V	K	S	P	C	K	R	C	T	M	D	S	S	D	P	A	S	P
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.		S	B	G	G	G	T		S	S		S							G	G	G	G	G	.	.	.	.	.	T	S	B	T	T			T	T																							S		T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template SS confidence
		1160	.														.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.						.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	M	L	P	M	S	D	G	R	C	S	L	V	W	C	H	P	L	E	R	R	E	E	V	L	S	W	S	D	E	K	F	C	R	E	L	Q	S	A	F	G	W	R	L	G	K	I	T	H	A	G	K	R	S	A	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Y	I	I	P	R	P	G	G	E	V	I	C	G	G	T	Y	G	V	G	D	W	D	L	S	V	N	P	E	T	V	Q	R	I	L	K	H	C	L	R	L	D	P	T	I	S	S	D	G	T	I	E	G	I	E	V	L	R	H	N	V	G	L	R	P	A	R	R	G	G	P	R	V	E	A	E	R	I	V	L
Template Known Secondary structure								T	T	T											T					S																		G	G	G	S	S	S	S	S	G	G	G															T	T	S
Template Predicted Secondary structure
Template SS confidence
		1222	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.						.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		L	A	L	T	H	A	A	R	S	I	T	H	R	T	V	L	V	G	N	A	A	Q	T	L	H	.	.	.	.	.	P	I	A	G	Q	G	F	N	L	G	M	R	D	V	M	S	L	A	E	T	L	T	Q	A	Q	E	R
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.
Template Conservation
Template Sequence		P	L	D	R	T	K	S	P	L	S	L	G	R	G	S	A	R	A	A	K	E	K	E	V	T	L	V	H	A	Y	G	F	S	S	A	G	Y	Q	Q	S	W	G	A	A	E	D	V	A	Q	L	V	D	E	A	F	Q	R
Template Known Secondary structure		S			T	T	T		T	T		S	S		S					S														G	G	G
Template Predicted Secondary structure
Template SS confidence
		1302	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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