 |
Job Description | P52101 | Confidence | 21.84% | Date | Thu Jan 5 12:05:19 GMT 2012 |
Rank | 123 | Aligned Residues | 57 |
% Identity | 11% | Template | d1whya_ |
SCOP info | Ferredoxin-like
| RNA-binding domain, RBD
| Canonical RBD
|
Resolution | UNK |
|
 |
  |   |
380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | E | S | G | N | I | C | L | R | S | S | L | H | G | A | R | V | Y | I | D | V | I | N | T | G | T | P | I | P | Q | E | E | R | A | M | I | F | E | P | F | F | Q | G | S | H | Q | R | K | G | A | V | K | G | S | G | L |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |
|   |
|
|
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
Template Sequence |   |
G | S | S | G | S | S | G | K | I | G | Y | G | K | A | N | P | T | T | R | L | W | V | G | G | L | G | P | N | T | S | L | A | A | L | A | R | E | F | D | R | F | G | S | I | R | T | I | D | H | V | K | G | D | S | F | A | Y |
Template Known Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| S |
|  |  |  |  |
|
|
| S | S |
|
|  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |
| S | S | S |
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|