Job Description P52101 Confidence 100.00% Date Thu Jan 5 12:05:19 GMT 2012 Rank 3 Aligned Residues 285 % Identity 14% Template c3d2rB_ PDB info PDB header:transferase Chain: B: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 4; PDBTitle: crystal structure of pyruvate dehydrogenase kinase isoform 4 in2 complex with adp Resolution 2.03 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	M	V	L	L	F	T	R	M	I	I	G	P	V	K	N	I	E	R	M	I	N	R	L	G	E	G	R	S	L	G	N	S	V	S	F	S	G	P	S	E	L	R	S	V	G	Q	R	I	L	W	L	S	E	R	L	S	W	L	E	S	Q	R	H	Q	F	L	R	H	L	S	H	E	L	K	T	P	L	A
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		R	T	S	F	A	F	L	R	Q	E	L	P	V	R	L	A	N	I	L	K	E	I	D	I	L	P	T	Q	.	L	V	N	T	S	S	V	Q	L	V	K	S	W	Y	I	Q	S	L	M	D	L	V	E	F	H	E	K	S	P	D	D	Q	K	A	L	S	D	F	V	D	T	L	I	K	V	R	N	R	H	H	N
Template Known Secondary structure																									T	S				.			T	S																			G	G	G	G	S		T	T																			T	T	T
Template Predicted Secondary structure																														.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.					.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.						.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.																																														.	.	.	.	.
Query SS confidence													.	.	.	.																																														.	.	.	.	.
Query Sequence		S	M	R	E	G	T	E	L	L	A	D	.	.	.	.	Q	V	V	G	P	L	T	P	E	Q	K	E	V	V	S	I	L	D	S	S	S	R	N	L	Q	K	L	I	E	Q	L	L	D	Y	N	R	K	Q	A	D	S	A	V	E	L	.	.	.	.	.	E	N	V	E	L	A	P	L	V	E	T	V	V	S	A
Query Conservation													.	.	.	.																																														.	.	.	.	.
Alig confidence													.	.	.	.																																														.	.	.	.	.
Template Conservation
Template Sequence		V	V	P	T	M	A	Q	G	I	I	E	Y	K	A	C	T	V	D	P	V	T	N	Q	N	L	Q	Y	F	L	D	R	F	Y	M	N	R	I	S	T	R	M	L	M	N	Q	H	I	L	I	F	S	D	S	Q	T	G	N	P	S	H	I	G	S	I	D	P	N	C	D	V	V	A	V	V	Q	D	A	F	E	C
Template Known Secondary structure																				T	T	T																															S	S					T	T	S	B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		338	.	340	.	.	.	.											.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380								.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Query Sequence		H	S	L	P	A	R	A	.	.	.	.	.	.	.	.	.	.	K	M	M	H	T	D	V	D	L	K	A	T	A	C	L	A	E	P	M	L	L	M	S	V	L	D	N	L	Y	S	N	A	V	H	Y	G	.	.	.	.	.	.	.	A	E	S	G	N	I	C	L	R	S	S	L	H	G	A	R	V	Y	I	D
Query Conservation									.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	M	L	C	D	Q	Y	Y	L	S	S	P	E	L	K	L	T	Q	V	N	G	K	F	P	D	Q	P	I	H	I	V	Y	V	P	S	H	L	H	H	M	L	F	E	L	F	K	N	A	M	R	A	T	V	E	H	Q	E	N	Q	P	S	L	T	P	I	E	V	I	V	V	L	G	K	E	D	L	T	I	K
Template Known Secondary structure											S												S	S	S	T	T	S																														T	T	T	S	S	S												S	S
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	N	T	G	T	P	I	P	Q	E	E	R	A	M	I	F	E	P	F	F	Q	G	S	H	Q	R	K	G	A	V	K	G	S	G	L	G	L	S	I	A	R	D	C	I	R	R	M	Q	G	E	L	Y	L	V	D	E	S	G	Q	D	V	C	F	R	I	E	L	P	S	S	K	N	T
Query Conservation
Alig confidence																																.	.
Template Conservation																																.	.
Template Sequence		I	S	D	R	G	G	G	V	P	L	R	I	I	D	R	L	F	S	Y	T	Y	S	T	A	P	T	P	P	L	A	.	.	G	F	G	Y	G	L	P	I	S	R	L	Y	A	K	Y	F	Q	G	D	L	N	L	Y	S	L	S	G	Y	G	T	D	A	I	I	Y	L	K	A	L	S	S	E
Template Known Secondary structure						S					G	G	G	T	T	G	G	G	S	T	T			S	S						S	.	.	S	S														T	T									T	T	T										S	S	T	T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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