Job Description P52101 Confidence 26.23% Date Thu Jan 5 12:05:19 GMT 2012 Rank 109 Aligned Residues 61 % Identity 11% Template c2vx8D_ PDB info PDB header:endocytosis,exocytosis Chain: D: PDB Molecule:nucleoporin-like protein rip, vesicle-associated PDBTitle: vamp7 longin domain hrb peptide complex Resolution 2.2 Å

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		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	L	L	M	S	V	L	D	N	L	Y	S	N	A	V	H	Y	G	A	E	S	G	N	I	C	L	R	S	S	L	H	G	A	R	V	Y	I	D	V	I	N	T	G	T	P	I	P	Q	E	E	R	A	M	I	F	E	P	F	F	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	V	T	E	Q	I	L	A	K	I	P	S	E	N	N	K	L	T	Y	S	H	G	N	Y	L	F	H	Y	I	C	Q	D	R	I	V	Y	L	C	I	T	D	D	D	F	S	R	A	F	S	F	L	N	E	V	K	K	R	F	Q	T
Template Known Secondary structure												S		S	S	S								T	T									T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions