Job Description P52101 Confidence 100.00% Date Thu Jan 5 12:05:19 GMT 2012 Rank 4 Aligned Residues 232 % Identity 13% Template c2q8fA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 1; PDBTitle: structure of pyruvate dehydrogenase kinase isoform 1 Resolution 2.03 Å

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.				.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		I	L	W	L	S	E	R	L	S	W	L	E	S	Q	R	H	Q	F	L	R	H	L	S	H	E	L	K	T	P	L	A	S	M	R	E	G	T	E	L	L	A	D	.	.	.	Q	V	V	G	P	L	T	P	E	Q	K	E	V	V	S	I	L	D	S	S	S	R	N	L	Q	K	L	I	E	Q	L	L	D	Y	N
Query Conservation																																												.	.	.
Alig confidence																																												.	.	.
Template Conservation
Template Sequence		L	L	D	F	K	D	K	S	A	E	D	A	K	A	I	Y	D	F	T	D	T	V	I	R	I	R	N	R	H	N	D	V	I	P	T	M	A	Q	G	V	I	E	Y	K	E	S	F	D	P	V	T	S	Q	N	V	Q	Y	F	L	D	R	F	Y	M	S	R	I	S	I	R	M	L	L	N	Q	H	S	L	L	F
Template Known Secondary structure			G	G	G	T	T	S		T	T																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.											.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query Sequence		R	K	Q	A	D	S	A	V	E	L	E	N	V	E	L	A	P	L	V	E	T	V	V	S	A	H	S	L	P	A	R	A	K	M	.	.	.	.	.	.	.	.	.	.	M	H	T	D	V	D	L	K	A	T	A	C	L	A	E	P	M	L	L	M	S	V	L	D	N	L	Y	S	N	A	V	H	Y	.	.	.
Query Conservation																																				.	.	.	.	.	.	.	.	.	.																																		.	.	.
Alig confidence				.	.	.																														.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation				.	.	.
Template Sequence		G	H	.	.	.	I	G	S	I	N	P	N	C	N	V	L	E	V	I	K	D	G	Y	E	N	A	R	R	L	C	D	L	Y	Y	I	N	S	P	E	L	E	L	E	E	L	N	A	K	S	P	G	Q	P	I	Q	V	V	Y	V	P	S	H	L	Y	H	M	V	F	E	L	F	K	N	A	M	R	A	T	M	E
Template Known Secondary structure				.	.	.	B	T	T	B																										S												S	S	S	T	T	S
Template Predicted Secondary structure				.	.	.
Template SS confidence
		203	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
						380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.							.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																											.	.	.	.	.	.
Query SS confidence		.	.	.	.																																											.	.	.	.	.	.
Query Sequence		.	.	.	.	G	A	E	S	G	N	I	C	L	R	S	S	L	H	G	A	R	V	Y	I	D	V	I	N	T	G	T	P	I	P	Q	E	E	R	A	M	I	F	E	P	F	F	.	.	.	.	.	.	Q	G	S	H	Q	R	K	G	A	V	K	G	S	G	L	G	L	S	I	A	R	D	C	I	R	R	M	Q
Query Conservation		.	.	.	.																																											.	.	.	.	.	.
Alig confidence		.	.	.	.																																											.	.	.	.	.	.
Template Conservation
Template Sequence		H	H	A	N	R	G	V	Y	P	P	I	Q	V	H	V	T	L	G	N	E	D	L	T	V	K	M	S	D	R	G	G	G	V	P	L	R	K	I	D	R	L	F	N	Y	M	Y	S	T	A	P	R	P	R	V	E	T	S	R	A	V	P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	Q	Y	F	Q
Template Known Secondary structure			S	T	T	T	T													S	S										S									G	G	G	G		T	T	T	T							S	S			S				S	S		T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	L	Y	L	V	D	E	S	G	Q	D	V	C	F	R	I	E	L	P	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	L	K	L	Y	S	L	E	G	Y	G	T	D	A	V	I	Y	I	K	A
Template Known Secondary structure										T	T	T										S
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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