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Job DescriptionP52101
Confidence100.00%DateThu Jan 5 12:05:19 GMT 2012
Rank6Aligned Residues226
% Identity15%Templatec1y8oA_
PDB info PDB header:transferaseChain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 3; PDBTitle: crystal structure of the pdk3-l2 complex
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260.........270...... ...280.........290.........300.........310
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Query Sequence  ILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLA. . . . . DQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLLD
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Template Sequence  LLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTL
Template Known Secondary structure  GGGG

TT
GGG


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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   311........320. ........330.........340..... ....350.........360.........370....
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Query Sequence  YNRKQADSAVE. . . . . . LENVELAPLVETVVSAHSLPARAK. . . . . . . . . . MMHTDVDLKATACLAEPMLLMSVLDNLYS
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Template Sequence  LFGGDTNPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFK
Template Known Secondary structure  S

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   171........180.........190.........200.........210.........220.........230.........240.........250
 
   375....380 .........390.........400.........410.........420.........430.........440......
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Query Sequence  NAVHYG. . . . . . . . AESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIR
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Template Sequence  NSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSP. . . . . . . . . LFGYGLPISRLYAR
Template Known Secondary structure  TT
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GGGG
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   251........260.........270.........280.........290.........300....... ..310.........320.
 
   447..450.........460.........470
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Query Sequence  RMQGELYLVDESGQDVCFRIELPS
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Template Sequence  YFQGDLKLYSMEGVGTDAVIYLKA
Template Known Secondary structure  TT
TTTS
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   337..340.........350.........360
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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