Job Description P52101 Confidence 97.96% Date Thu Jan 5 12:05:19 GMT 2012 Rank 47 Aligned Residues 79 % Identity 23% Template c1ea6A_ PDB info PDB header:dna repair Chain: A: PDB Molecule:pms1 protein homolog 2; PDBTitle: n-terminal 40kda fragment of nhpms2 complexed with adp Resolution 2.7 Å

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		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	S	V	L	D	N	L	Y	S	N	A	V	H	Y	G	A	E	S	G	N	I	C	L	R	S	S	L	H	G	A	R	V	Y	I	D	V	I	N	T	G	T	P	I	P	Q	E	E	R	A	M	I	F	E	P	F	F	Q	G	S	H	Q	R	K	G	A	V	K	G	S	G	L	G	L	S	I	A	R	D	C
Query Conservation
Alig confidence																			.	.														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	T	A	V	K	E	L	V	E	N	S	L	D	A	G	A	.	.	T	N	I	D	L	K	L	K	D	Y	G	V	D	.	L	I	E	V	S	D	N	G	C	G	V	E	E	E	N	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	L	E	A	L	S	S	L	C	A	L
Template Known Secondary structure																T	T		.	.	S								T	T	T	T	S	.								S					T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																			.	.														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.																		.	.	.	.	.	.	.	.	90	.	.	.	.
		445	.	.	.	.	450	.	.	.	.	.	.	.		.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		I	R	R	M	Q	G	E	L	Y	L	V	D	E	.	S	G	Q	D	V	C	F	R	I	E	L
Query Conservation															.
Alig confidence		.	.	.	.	.									.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	S	D	V	T	I	S	T	C	H	A	S	A	K	V	G	T	R	L	M	F
Template Known Secondary structure		.	.	.	.	.	S									T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions