Job Description P0A744 Confidence 4.93% Date Thu Jan 5 11:04:46 GMT 2012 Rank 99 Aligned Residues 53 % Identity 25% Template c2k2bA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:degenerin mec-4; PDBTitle: sparse-constraint solution nmr structure of micelle-2 solublized cytosolic amino terminal domain of c. elegans3 mechanosensory ion channel subunit mec-4. new york4 consortium on membrane protein structure (nycomps) (casp5 target) Resolution UNK

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		Y	T	G	G	Y	T	P	N	P	T	Y	R	E	V	.	C	S	G	D	T	G	H	A	E	A	V	R	I	V	Y	D	P	S	V	I	S	Y	E	Q	L	L	Q	V	F	W	E	N	H	D	P	A	Q	G	M	R	Q	G	N	D	H	G
Query Conservation																.
Alig confidence																.							.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		F	G	Y	G	E	C	F	N	S	T	E	S	E	V	Q	C	E	L	I	T	G	.	.	.	.	.	.	.	E	F	D	P	K	L	L	P	Y	D	K	R	L	A	W	H	F	K	E	F	C	Y	K	T	S	A	H	G	I	P	M	I	G
Template Known Secondary structure		S		S		T	T	T	S	S				S	S							S	.	.	.	.	.	.	.			S	T	T	S	S														T	S		S	S		S	S			S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.								.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions