Job Description P32709 Confidence 3.41% Date Thu Jan 5 11:50:27 GMT 2012 Rank 56 Aligned Residues 87 % Identity 5% Template d1fftb2 SCOP info Transmembrane helix hairpin Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Resolution 3.50

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	F	T	S	V	M	S	M	G	V	M	L	F	Q	L	Y	M	V	V	L	V	L	W	L	A	K	I	F	E	H	D	L	L	A	L	Q	Q	R	W	L	P	K	L	G	I	V	Q	K	V	L	S	L	L	T	P	V	H	R	G	L	E	T	L	M	L	V	L	A	V	L	L	G	A	Y	T	G	F	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	P	K	G	Q	I	G	L	E	Q	R	S	L	I	L	T	A	F	G	L	M	L	I	V	V	I	P	A	I	L	M	A	V	G	F	A	W	K	Y	R	A	S	N	K	D	A	K	Y	S	P	N	W	S	H	S	N	K	V	E	A	V	V	W	T	V	P	I	L	I	I	I	F	L	A	V	L	T	W	K
Template Known Secondary structure		S	S			S																	T	T	T	T	T	T								T	T	T	T	T	T	T	T	S	T	T	T		S	S								S						T	T
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	L	K	S	Y	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	H	A	L	E	P
Template Known Secondary structure			S		T	T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions