Job Description P32709 Confidence 100.00% Date Thu Jan 5 11:50:27 GMT 2012 Rank 1 Aligned Residues 235 % Identity 22% Template c2vpzG_ PDB info PDB header:oxidoreductase Chain: G: PDB Molecule:hypothetical membrane spanning protein; PDBTitle: polysulfide reductase native structure Resolution 2.40 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		S	L	V	W	D	W	P	I	A	I	Y	L	F	L	I	G	I	S	A	G	L	V	T	L	A	V	L	L	R	R	F	Y	P	Q	A	G	G	A	D	S	T	L	L	R	T	T	L	I	V	G	P	G	A	V	I	L	G	L	L	I	L	V	F	H	L	T	R	P	W	T	F	W	K	.	.	L	M	F	H	Y
Query Conservation																																																																											.	.
Alig confidence																																		.	.	.	.	.	.	.																																			.	.
Template Conservation																																		.	.	.	.	.	.	.
Template Sequence		Q	E	F	W	H	W	T	N	A	L	H	F	V	L	V	G	L	A	G	G	V	A	L	L	A	A	L	L	H	L	K	G	.	.	.	.	.	.	.	D	A	E	A	R	R	Y	T	L	Y	A	L	M	L	I	A	L	D	L	F	I	L	W	A	E	S	P	A	R	F	R	F	T	H	I	W	L	F	L	S	F
Template Known Secondary structure		S		S	S																											T	T	.	.	.	.	.	.	.		T	T	T	T	T	T																		T		T	T	G	G	G	T		G	G	G	G	G	S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.								.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	T	S	V	M	S	M	G	V	M	L	F	Q	L	Y	M	V	V	L	V	L	W	L	A	K	I	F	E	H	D	L	L	A	L	Q	Q	R	W	L	P	K	L	G	I	V	Q	K	V	L	S	L	L	T	P	V	H	R	G	L	E	T	L	M	L	V	L	A	V	L	L	G	A	Y	T	G	F	L	L	S
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	P	T	S	P	I	W	W	G	A	W	G	L	G	L	G	F	L	T	G	G	L	L	Y	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	S	Q	R	A	L	A	W	A	L	L	V	F	S	L	V	A	L	S	Y	P	G	L	A	L	A
Template Known Secondary structure			T	T																						T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S		S	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																												.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K	S	Y	P	F	L	N	N	P	I	L	P	V	L	F	L	F	S	G	I	S	S	G	A	A	V	A	L	I	A	M	A	I	R	Q	R	S	N	P	H	S	T	E	A	Q	F	V	H	R	M	E	I	P	V	V	W	G	E	I	F	L	L	V	A	F	F	V	G	L	A	L	G	D	D	G	K	V	R
Query Conservation
Alig confidence																	.																	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation																	.																	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Sequence		V	N	L	N	R	P	L	W	N	G	L	M	A	G	L	.	F	P	L	T	A	L	V	L	A	L	G	L	A	A	L	L	.	.	.	.	.	.	.	.	K	S	P	W	A	L	F	P	L	R	V	L	A	G	A	S	L	L	L	A	L	.	.	.	.	.	.	.	.	.	L	Y	P	L	T	L	P	P	E	A
Template Known Secondary structure		T		T	T		T	T	S		T	T					.																T	.	.	.	.	.	.	.	.	T		S	T	T																	.	.	.	.	.	.	.	.	.		G	G	G	G	S
Template Predicted Secondary structure																	.																	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.									.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.										.	.	190	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	A	A	L	G	G	G	F	W	T	W	W	F	W	L	G	V	A	G	L	G	L	I	V	P	M	L	L	K	P	W	V	N	R	S	S	G	I	P	A	V	L	A	A	C	G	A	S	L	V	G	V	L	M	L	R	F	F	I	L	Y	A	G	Q
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Sequence		R	G	H	L	L	E	E	A	G	F	W	Y	G	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	L	G	L	G	T	F	W	Q	E	R	L	A	P	W	A	G	L	L	A	A	A	G	.	.	.	L	R	A	L	L	V	L	A	G	Q
Template Known Secondary structure									S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G	G	S	T	T	T	T												.	.	.									T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.															.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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