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Job DescriptionP32709
Confidence3.74%DateThu Jan 5 11:50:27 GMT 2012
Rank43Aligned Residues126
% Identity13%Templatec2jagA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:halorhodopsin; PDBTitle: l1-intermediate of halorhodopsin t203v
Resolution1.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190.........200.........210.........220.........230.........240.........250......
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Query Sequence  NNPILPVLFLFSGISSGAAVALIAMAIRQRSNPHSTEAQFVHRMEIPVVWGEIFLLVAFFVGLALGDDGKVRALVAALGG
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Template Sequence  ENALLSSSLWVNVALAGIAILVFVYMGRTIRPGRPRLIWGATLMIPLVSISSYLGLLSGLTVGMIEMPAGHALAGEMVRS
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Query Sequence  GFWTWWFWLGVAGLGLIVPMLLKPWVNRSSGIPAVLAACGASLVGVLM
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Template Sequence  QWGRYLTWA. . LSTPMILLALGLLADVDLGSLFTVIAADIGMCVTGLA
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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