Job Description P30850 Confidence 100.00% Date Wed Jan 25 15:20:48 GMT 2012 Rank 7 Aligned Residues 386 % Identity 25% Template d2r7da2 SCOP info OB-fold Nucleic acid-binding proteins RNB domain-like Resolution 1.80

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		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.										.	.	.	.
Predicted Secondary structure																																																			.	.	.																.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.																.	.	.	.	.	.	.	.	.
Query Sequence		N	H	E	F	K	E	G	D	W	A	V	A	E	M	R	R	H	P	L	K	G	D	R	S	F	Y	A	E	L	T	Q	Y	I	T	F	G	D	D	H	F	V	P	W	W	V	T	L	A	R	.	.	.	H	N	L	E	K	E	A	P	D	G	V	A	T	E	M	.	.	.	.	.	.	.	.	.	L	D	E	G
Query Conservation																																																			.	.	.																.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.																												.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		Q	P	E	L	T	P	A	Q	R	T	E	V	E	L	L	A	R	G	.	.	.	.	R	A	D	K	S	R	V	L	R	D	L	K	L	P	E	T	P	E	A	A	H	A	L	L	L	R	L	G	V	W	D	E	A	R	T	P	Y	A	D	R	L	R	A	A	L	N	A	V	E	L	P	V	P	D	F	D	P	A
Template Known Secondary structure																		T	T	.	.	.	.	S		S								T	T				S												T	S	S		T	T								T	T				S											T	T
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20					.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	R	E	D	L	T	A	L	D	F	V	T	I	D	S	A	S	T	E	D	M	D	D	A	L	F	A	K	A	L	P	D	D	K	L	Q	L	I	V	A	I	A	D	P	T	A	W	I	A	E	G	S	K	L	D	K	A	A	K	I	R	A	F	T	N	Y	L	P	G	F	N	I	P	M	L	P	R	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	R	L	D	L	T	H	L	P	T	F	A	I	D	D	E	G	N	Q	D	P	D	D	A	V	G	V	E	D	L	G	G	G	L	T	R	L	W	V	H	V	A	D	V	A	A	L	V	A	P	D	S	P	L	D	L	E	A	R	A	R	G	A	T	L	Y	L	P	D	R	T	I	G	X	L	P	D	E	L
Template Known Secondary structure		S						T	T	S								T	T														S	T	T											G	G	G	T			T	T	S											B					S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	D	L	C	S	L	R	A	N	E	V	R	P	V	L	A	C	R	M	T	L	S	A	D	G	T	I	E	D	N	I	E	F	F	A	A	T	I	E	S	K	A	K	L	V	Y	D	Q	V	S	D	W	L	E	N	T	G	D	W	Q	P	E	S	E	A	I	A	E	Q	V	R	L	L	A	Q	I	C	Q	R
Query Conservation
Alig confidence					.																											.												.																		.	.	.	.	.	.	.	.	.	.
Template Conservation					.																											.												.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	K	.	A	G	L	G	L	H	E	V	S	P	A	L	S	I	C	L	D	L	D	P	D	G	N	A	E	A	.	V	D	V	L	L	T	R	V	K	V	Q	.	R	L	A	Y	Q	E	A	Q	A	R	L	E	A	G	E	E	P	.	.	.	.	.	.	.	.	.	.	F	V	T	L	A	R	L	A	R	A
Template Known Secondary structure					.		S	T	T	S	S	S	S												T	T	S					.												.													T	T		T	T	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.																											.												.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.											.	.	.	.	220	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	E	W	R	H	N	H	A	L	V	F	K	D	R	P	D	Y	R	F	I	L	G	E	K	G	E	V	L	D	I	V	A	E	P	R	R	I	A	N	R	I	V	E	E	A	M	I	A	A	N	I	C	A	A	R	V	L	R	D	K	L	G	F	G	I	Y	N	V	H	M	G	F	D	P	A	N	A	D	A
Query Conservation
Alig confidence																												.	.																																																	.	.	.	.
Template Conservation																												.	.																																																	.	.	.	.
Template Sequence		S	R	R	L	R	E	G	E	G	A	L	S	I	D	L	P	E	V	R	V	K	A	D	E	T	G	.	.	A	S	V	F	P	L	P	K	P	E	X	R	T	V	V	Q	E	C	X	T	L	A	G	W	G	T	A	I	F	A	D	D	N	E	I	P	L	P	F	A	T	Q	D	Y	P	T	R	E	.	.	.	.
Template Known Secondary structure									T	T															T	T		.	.																																	T	T												S	S		.	.	.	.
Template Predicted Secondary structure																												.	.																																																	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	L	L	K	T	H	G	L	H	V	D	A	E	E	V	L	T	L	D	G	F	C	K	L	R	R	E	L	D	A	Q	P	T	G	F	L	D	S	R	I	R	R	F	Q	S	F	A	E	I	S	T	E	P	G	P	H	F	G	L	G	L	E	A	Y	A	T	W	T	S	P	I	R	K	Y	G	D	M	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	G	D	T	L	P	A	X	W	A	R	R	K	T	L	A	R	T	R	F	Q	P	S	P	G	P	H	H	G	X	G	L	D	L	Y	A	Q	A	T	S	P	X	R	R	Y	L	D	L	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S																		S	S				B	T	T	T	T	B	S						S		T	T	T	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		507	.	.	510	.	.	.	.	.	.	.	.	.			520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		N	H	R	L	L	K	A	V	I	K	G	E	T	.	.	A	T	R	P	Q	D	E	I	T	V	Q	M	A	E	R	R	R	L	N	R	M	A	E	R	D	V	G	D	W	L	Y	A	R	F	L	K	D	K
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		V	H	Q	Q	L	R	A	F	L	A	G	R	D	P	L	S	S	K	V	X	A	A	H	I	A	E	S	Q	X	N	A	D	A	T	R	Q	A	E	R	L	S	R	R	H	H	T	L	R	F	I	A	A	Q
Template Known Secondary structure											T	T																																									T
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.