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Job DescriptionP30850
Confidence100.00%DateWed Jan 25 15:20:48 GMT 2012
Rank7Aligned Residues386
% Identity25%Templated2r7da2
SCOP infoOB-fold Nucleic acid-binding proteins RNB domain-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NHEFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVPWWVTLAR. . . HNLEKEAPDGVATEM. . . . . . . . . LDEG
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Template Sequence  QPELTPAQRTEVELLARG. . . . RADKSRVLRDLKLPETPEAAHALLLRLGVWDEARTPYADRLRAALNAVELPVPDFDPA
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TT


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   3......10.........20 .........30.........40.........50.........60.........70........
 
   187..190.........200.........210.........220.........230.........240.........250.........260......
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Query Sequence  LVREDLTALDFVTIDSASTEDMDDALFAKALPDDKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTNYLPGFNIPMLPREL
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Template Sequence  EERLDLTHLPTFAIDDEGNQDPDDAVGVEDLGGGLTRLWVHVADVAALVAPDSPLDLEARARGATLYLPDRTIGXLPDEL
Template Known Secondary structure  S


TTS

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GGGT

TTS
B

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   7980.........90.........100.........110.........120.........130.........140.........150........
 
   267..270.........280.........290.........300.........310.........320.........330.........340......
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Query Sequence  SDDLCSLRANEVRPVLACRMTLSADGTIEDNIEFFAATIESKAKLVYDQVSDWLENTGDWQPESEAIAEQVRLLAQICQR
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Template Sequence  VAK. AGLGLHEVSPALSICLDLDPDGNAEA. VDVLLTRVKVQ. RLAYQEAQARLEAGEEP. . . . . . . . . . FVTLARLARA
Template Known Secondary structure  .STTSSSS
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   159160. ........170.........180....... ..190........ .200.........210..... ....220.....
 
   347..350.........360.........370.........380.........390.........400.........410.........420......
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Query Sequence  RGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEAMIAANICAARVLRDKLGFGIYNVHMGFDPANADA
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Template Sequence  SRRLREGEGALSIDLPEVRVKADETG. . ASVFPLPKPEXRTVVQECXTLAGWGTAIFADDNEIPLPFATQDYPTRE. . . .
Template Known Secondary structure  TT







TT..



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   226...230.........240.........250. ........260.........270.........280.........290.........
 
   427..430.........440.........450.........460.........470.........480.........490.........500......
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Query Sequence  LAALLKTHGLHVDAEEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMI
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VAGDTLPAXWARRKTLARTRFQPSPGPHHGXGLDLYAQATSPXRRYLDLV
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S


SS


BTTTTBS




S
TTTB
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   300.........310.........320.........330.........340.........
 
   507..510......... 520.........530.........540.........550.......
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Query Sequence  NHRLLKAVIKGET. . ATRPQDEITVQMAERRRLNRMAERDVGDWLYARFLKDK
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Template Sequence  VHQQLRAFLAGRDPLSSKVXAAHIAESQXNADATRQAERLSRRHHTLRFIAAQ
Template Known Secondary structure  TT




T
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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