Return to main results Retrieve Phyre Job Id

Job DescriptionP30850
Confidence99.62%DateWed Jan 25 15:20:48 GMT 2012
Rank8Aligned Residues73
% Identity96%Templated2ix0a2
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution2.44

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 

























Query SS confidence 












































































Query Sequence  DNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRIIAVIHSEKERESAEPEELVE
Query Conservation         

  
        
 
    





  
   



     
 
  

 
 
 
        
 

 


Alig confidence 

























..

































..












Template Conservation   
  
 


  
        


   .. 



  

  




   
  
  

 
 
 
 ..  
     




Template Sequence  DDPLLAQLKQQLHSQTPRAEGVVKAT. . EFGFLEVDAQKSYFIPPPQMKKVMHGDRIIAVIH. . SERESAEPEELVE
Template Known Secondary structure 

TS


..

TT
TT

TT
..



Template Predicted Secondary structure 





..












..







Template SS confidence 












































































   4.....10.........20......... 30.........40.........50.........60... ......70......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions