Return to main results Retrieve Phyre Job Id

Job DescriptionP30850
Confidence89.35%DateWed Jan 25 15:20:48 GMT 2012
Rank83Aligned Residues54
% Identity24%Templated1yvca1
SCOP infoOB-fold Nucleic acid-binding proteins TRAM domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20...... ...30.........40.........50.........60.........70 ......
Predicted Secondary structure 


.




















.
Query SS confidence 









.











































.





Query Sequence  SQTPRAEGVV. KATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRIIAVIHSEKER. ESAEPE
Query Conservation         
 
.    





  
   



     
 
  

 
 
 
      .  
 

Alig confidence 









.











.







.....

















.





Template Conservation    
    
 
  
   
 

 
 . 
 



 .....





 
 
 

  

    
 

Template Sequence  EAGKEYEVTIEDMGKGGDGIARI. DGFVVFVP. . . . . NAEKGSVINVKVTAVKEKFAFAERV
Template Known Secondary structure 
TT



TTS
.TTT.....T

TT

SS

Template Predicted Secondary structure 








.


.....









Template SS confidence 





























































   14.....20.........30...... ...40.... .....50.........60.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions