 |
Job Description | P30850 | Confidence | 96.92% | Date | Wed Jan 25 15:20:48 GMT 2012 |
Rank | 52 | Aligned Residues | 63 |
% Identity | 29% | Template | d1a62a2 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 1.55 |
|
 |
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
. | 40 | |
|
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . |
|
| . | . | . | . |
|
|  |  |  |  |
|  |  |  |  |
|
| . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | A | E | G | V | V | K | A | T | E | K | G | F | G | F | L | E | V | . |
. |
D | A | . |
. |
. |
. |
Q | K | S | Y | F | I | P | P | P | Q | M | K | K | . |
. |
V | M | H | G | D | R | I | I | A | V | I | H | S | E | K | E | R | E | S | A | E | P | E | E | L | V | E | P | F | L |
Query Conservation |   |
  |   |   |
|   |
|   |   |   |   |
|
|
|
|
|
|   |   | . | . |
|   | . | . | . | . |   |   |
|
|
|
|   |   |   |   |   |
|   | . | . |
|   |   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|   |   |
|
|
|
|
|
|
|   |   |   |   |
|
|   |   |   |
|   |
|
|
|
|
|   |
|   |
|
|
|
|   |
|
|   |
|
|   |
|   |
|   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|
Template Sequence |   |
F | G | D | G | V | L | E | I | L | Q | D | G | F | G | F | L | R | S | A | D | S | S | Y | L | A | G | P | D | D | I | Y | V | S | P | S | Q | I | R | R | F | N | L | R | T | G | D | T | I | S | G | K | I | R | P | P | K | E | G | E | R | Y | F | A | L | L | K | V | N | E | V | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |
| G | G | G | T | T |
|
|
| T | T |
|  |  |  |
|  |  |  |  |  |  | T | T |
|
| T | T |
|  |  |  |  |  |  |  |
|
|
| T | T |
|
| S |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|