Job Description P30850 Confidence 94.11% Date Wed Jan 25 15:20:48 GMT 2012 Rank 78 Aligned Residues 56 % Identity 23% Template c3trzE_ PDB info PDB header:rna binding protein/rna Chain: E: PDB Molecule:protein lin-28 homolog a; PDBTitle: mouse lin28a in complex with let-7d microrna pre-element Resolution 2.90 Å

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		21	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure										.	.													.	.	.	.	.	.	.	.												.	.	.	.	.
Query SS confidence										.	.													.	.	.	.	.	.	.	.												.	.	.	.	.
Query Sequence		R	A	E	G	V	V	K	A	.	.	T	E	K	G	F	G	F	L	E	V	D	A	.	.	.	.	.	.	.	.	Q	K	S	Y	F	I	P	P	P	Q	M	.	.	.	.	.	K	K	V	M	H	G	D	R	I	I	A	V	I	H	S	E	K	E	R	E	S	A	E	P	E
Query Conservation										.	.													.	.	.	.	.	.	.	.												.	.	.	.	.
Alig confidence										.	.													.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation
Template Sequence		H	G	A	G	I	C	K	W	F	N	V	R	M	G	F	G	F	L	S	M	T	A	R	A	G	V	A	L	D	P	P	V	D	V	F	V	H	Q	S	K	L	H	M	E	G	F	R	S	L	K	E	G	E	A	V	E	F	T	F	K	K	S	A	K	G	L	E	S	I	R	V
Template Known Secondary structure												T	T	T	T										T	T													G	G	G	B			S	S	S					T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions