Job Description P30850 Confidence 97.94% Date Wed Jan 25 15:20:48 GMT 2012 Rank 35 Aligned Residues 70 % Identity 4% Template c3psiA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451) Resolution 3.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	G	T	D	T	R	F	A	A	E	I	V	D	I	S	R	G	G	M	R	V	R	L	V	D	N	G	A	I	A	F	I	P	A	P	F	L	H	A	V	R	D	E	L	V	C	S	Q	E	N	G	T	V	Q	I	K	G	E	T	V	Y	K	V	T	D	V	I	D	V	T	I	A	E	V	R	M	E	T	R
Query Conservation
Alig confidence					.	.																				.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.																				.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	G	.	.	S	I	I	P	V	R	V	E	R	F	W	H	N	D	I	I	C	T	T	.	N	S	E	V	E	C	V	V	N	A	Q	R	H	A	G	A	Q	L	R	.	.	.	.	.	.	.	.	.	.	.	R	P	A	N	E	I	Y	E	I	G	K	T	Y	P	A	K	V	I	Y	I	D	Y	A	N	I
Template Known Secondary structure			T	T	.	.												S	S							.	T	T	S							T	T	S	S	S	S	T	T	S		.	.	.	.	.	.	.	.	.	.	.	S		S	T	T	T	S		T	T												G	G	G	T
Template Predicted Secondary structure					.	.																				.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1133	.	.			.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.		.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.												.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.
		637	.	.	640
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	E	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1199	1200	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions