Return to main results Retrieve Phyre Job Id

Job DescriptionP30850
Confidence24.79%DateWed Jan 25 15:20:48 GMT 2012
Rank138Aligned Residues42
% Identity14%Templatec3egnA_
PDB info PDB header:splicingChain: A: PDB Molecule:rna-binding protein 40; PDBTitle: c-terminal rna recognition motif of the u11/u12 65k protein
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.
Predicted Secondary structure 





















Query SS confidence 









































Query Sequence  EKGFGFLEVDAQKSYFIPPPQMKKVMHGDRIIAVIHSEKERE
Query Conservation   





  
   



     
 
  

 
 
 
       
Alig confidence 









































Template Conservation   

 


 
   
 
  

  


    

 
 
  
    
Template Sequence  MKGQAFIGLPNEKAAAKALKEANGYVLFGKPMVVQFARSARP
Template Known Secondary structure  T
SSTTBTT



S

Template Predicted Secondary structure 













Template SS confidence 









































   465....470.........480.........490.........500......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions