Job Description P30850 Confidence 95.96% Date Wed Jan 25 15:20:48 GMT 2012 Rank 66 Aligned Residues 69 % Identity 20% Template c3ayhB_ PDB info PDB header:transcription Chain: B: PDB Molecule:dna-directed rna polymerase iii subunit rpc8; PDBTitle: crystal structure of the c17/25 subcomplex from s. pombe rna2 polymerase iii Resolution 2.19 Å

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		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610									.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.
Query Sequence		T	R	F	A	A	E	I	V	D	I	S	R	G	G	M	R	V	R	L	V	D	N	G	A	I	A	F	I	P	A	P	F	L	H	A	V	R	D	E	L	V	C	S	Q	E	N	G	T	V	.	.	.	.	.	.	.	.	Q	I	K	G	E	T	V	Y	K	V	T	D	V	I	D	V	T	I	A	E	V	R	M
Query Conservation																																																			.	.	.	.	.	.	.	.
Alig confidence																					.																			.	.										.	.	.	.	.	.	.	.
Template Conservation																					.																			.	.
Template Sequence		E	V	M	L	G	K	I	K	S	C	S	E	E	G	I	R	V	T	I	.	S	F	F	D	D	I	F	I	P	K	D	M	L	F	D	P	C	V	.	.	F	R	P	D	E	R	A	W	V	W	K	I	E	G	E	D	G	S	E	G	T	E	L	Y	F	D	I	D	E	E	I	R	F	Q	I	E	S	E	D	F
Template Known Secondary structure													T	T							.	S	S								G	G	G	B		T	T			.	.			G	G	G	T										T	T	S									T	T
Template Predicted Secondary structure																					.																			.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions