Return to main results Retrieve Phyre Job Id

Job DescriptionP30850
Confidence48.99%DateWed Jan 25 15:20:48 GMT 2012
Rank110Aligned Residues57
% Identity16%Templatec2xnqA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:nuclear polyadenylated rna-binding protein 3; PDBTitle: structural insights into cis element recognition of non-2 polyadenylated rnas by the nab3-rrm
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60........
Predicted Secondary structure 





















Query SS confidence 



























































Query Sequence  AQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRIIAVIHSEK
Query Conservation    

  
        
 
    





  
   



     
 
  

 
 
 
    
Alig confidence 

















...






































Template Conservation    
   
   
 
     ... 

 


 
     
  
         
  
 
  
 

Template Sequence  EDLFRIFSPYGHIMQINI. . . KNAFGFIQFDNPQSVRDAIEESQEMNFGKKLILEVSSSN
Template Known Secondary structure  GGGS
...
SSSS

TTSTT




Template Predicted Secondary structure 



...











Template SS confidence 



























































   345....350.........360.. .......370.........380.........390.........400.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions