Job Description P30850 Confidence 96.24% Date Wed Jan 25 15:20:48 GMT 2012 Rank 61 Aligned Residues 57 % Identity 23% Template c2kcmA_ PDB info PDB header:nucleic acid binding protein Chain: A: PDB Molecule:cold shock domain family protein; PDBTitle: solution nmr structure of the n-terminal ob-domain of so_1732 from2 shewanella oneidensis. northeast structural genomics consortium3 target sor210a. Resolution UNK

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		22	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.																									.	.	.	.	.	.
Query SS confidence								.	.																									.	.	.	.	.	.
Query Sequence		A	E	G	V	V	K	.	.	A	T	E	K	G	F	G	F	L	E	V	D	A	Q	K	S	Y	F	I	P	P	P	Q	M	.	.	.	.	.	.	K	K	V	M	H	G	D	R	I	I	A	V	I	H	S	E	K	E	R	E	S	A	E	P	E	E	L
Query Conservation								.	.																									.	.	.	.	.	.
Alig confidence								.	.																									.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	G	K	V	V	S	Y	L	A	A	K	K	Y	G	F	I	Q	G	D	D	G	E	S	Y	F	L	H	F	S	E	L	L	D	K	K	D	E	G	K	L	V	K	G	S	M	V	H	F	D	P	T	P	T	P	K	G	L	A	A	K	A	I	S	L
Template Known Secondary structure											T	T	T	T							T	T	S							G	G	G	S	S		S	G	G	G	T	T			T	T	S									T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions